RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 RFC5P40937 340 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 PPP4R3AQ6IN85 833 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 AGMOQ6ZNB7 445 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 GPR149Q86SP6 731 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 ZNF280BQ86YH2 543 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 CEP170P1Q96L14 293 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 FAM193BQ96PV7 902 aaPredicted RBP16.65■□□□□ 0.26
PRKDC-204ENST00000521331 VN1R3Q9BXE9 311 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 SLKQ9H2G2 1235 aaPredicted RBP16.65■□□□□ 0.26
PRKDC-204ENST00000521331 DHX33Q9H6R0 707 aaKnown RBP16.65■□□□□ 0.26
PRKDC-204ENST00000521331 KCNMB3Q9NPA1 279 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 VAV3Q9UKW4 847 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 USP34Q70CQ2 3546 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 CCDC194A0A1B0GVG4 234 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 KLRC2P26717 231 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 CLCN4P51793 760 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 NPEPPSP55786 919 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 LAMTOR4Q0VGL1 99 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 ASTLQ6HA08 431 aaPredicted RBP16.64■□□□□ 0.25
PRKDC-204ENST00000521331 KANK3Q6NY19 840 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 TMC5Q6UXY8 1006 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 CCDC149Q6ZUS6 474 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 OTOP3Q7RTS5 596 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 NEK8Q86SG6 692 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 CNNM3Q8NE01 707 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 TCP11Q8WWU5 503 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 PRPF31Q8WWY3 499 aaKnown RBP16.64■□□□□ 0.25
PRKDC-204ENST00000521331 KLHL5Q96PQ7 755 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 NAP1L4Q99733 375 aaKnown RBP16.64■□□□□ 0.25
PRKDC-204ENST00000521331 TM6SF1Q9BZW5 370 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 MFSD1Q9H3U5 465 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 UBN1Q9NPG3 1134 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 MRPL17Q9NRX2 175 aaKnown RBP16.64■□□□□ 0.25
PRKDC-204ENST00000521331 FAN1Q9Y2M0 1017 aa16.64■□□□□ 0.25
PRKDC-204ENST00000521331 WDR81Q562E7 1941 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 PROB1E7EW31 1015 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 TBX3O15119 743 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 ASAP2O43150 1006 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 B4GALT3O60512 393 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 CDKL5O76039 1030 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 DDHD2O94830 711 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 SRGAP2CP0DJJ0 459 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 XBP1P17861 261 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 PCBP1Q15365 356 aaKnown RBP eCLIP16.63■□□□□ 0.25
PRKDC-204ENST00000521331 C15orf39Q6ZRI6 1047 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 OTUD6AQ7L8S5 288 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 C4orf19Q8IY42 314 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 TMEM105Q8N8V8 129 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 TMEM143Q96AN5 459 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 AIFM3Q96NN9 605 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 PHF20Q9BVI0 1012 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 SMOC2Q9H3U7 446 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 SSX2IPQ9Y2D8 614 aa16.63■□□□□ 0.25
PRKDC-204ENST00000521331 MARCH6O60337 910 aa16.62■□□□□ 0.25
PRKDC-204ENST00000521331 CCNT1O60563 726 aaKnown RBP16.62■□□□□ 0.25
PRKDC-204ENST00000521331 LILRB3O75022 631 aa16.62■□□□□ 0.25
PRKDC-204ENST00000521331 SOD2P04179 222 aa16.62■□□□□ 0.25
PRKDC-204ENST00000521331 CNPP09543 421 aaKnown RBP16.62■□□□□ 0.25
PRKDC-204ENST00000521331 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
PRKDC-204ENST00000521331 HOXA11P31270 313 aaPredicted RBP16.62■□□□□ 0.25
PRKDC-204ENST00000521331 YWHABP31946 246 aaKnown RBP16.62■□□□□ 0.25
PRKDC-204ENST00000521331 CLCN5P51795 746 aa16.62■□□□□ 0.25
PRKDC-204ENST00000521331 STK3Q13188 491 aa16.62■□□□□ 0.25
PRKDC-204ENST00000521331 EPHA7Q15375 998 aa16.62■□□□□ 0.25
PRKDC-204ENST00000521331 UBXN11Q5T124 520 aa16.62■□□□□ 0.25
PRKDC-204ENST00000521331 ELMSAN1Q6PJG2 1045 aa16.62■□□□□ 0.25
PRKDC-204ENST00000521331 ZNF579Q8NAF0 562 aaKnown RBP16.62■□□□□ 0.25
PRKDC-204ENST00000521331 LXNQ9BS40 222 aa16.62■□□□□ 0.25
PRKDC-204ENST00000521331 MINDY3Q9H8M7 445 aa16.62■□□□□ 0.25
PRKDC-204ENST00000521331 WRAP73Q9P2S5 460 aaPredicted RBP16.62■□□□□ 0.25
PRKDC-204ENST00000521331 DPP7Q9UHL4 492 aa16.62■□□□□ 0.25
PRKDC-204ENST00000521331 KCNJ14Q9UNX9 436 aa16.62■□□□□ 0.25
PRKDC-204ENST00000521331 NRP1O14786 923 aa16.61■□□□□ 0.25
PRKDC-204ENST00000521331 ERLIN2O94905 339 aa16.61■□□□□ 0.25
PRKDC-204ENST00000521331 POMCP01189 267 aa16.61■□□□□ 0.25
PRKDC-204ENST00000521331 SSBP05455 408 aaKnown RBP eCLIP16.61■□□□□ 0.25
PRKDC-204ENST00000521331 URODP06132 367 aa16.61■□□□□ 0.25
PRKDC-204ENST00000521331 AXLP30530 894 aa16.61■□□□□ 0.25
PRKDC-204ENST00000521331 NCBP1Q09161 790 aaKnown RBP16.61■□□□□ 0.25
PRKDC-204ENST00000521331 EMC2Q15006 297 aa16.61■□□□□ 0.25
PRKDC-204ENST00000521331 FERMT3Q86UX7 667 aa16.61■□□□□ 0.25
PRKDC-204ENST00000521331 RNF149Q8NC42 400 aa16.61■□□□□ 0.25
PRKDC-204ENST00000521331 CMASQ8NFW8 434 aaPredicted RBP16.61■□□□□ 0.25
PRKDC-204ENST00000521331 CCDC51Q96ER9 411 aa16.61■□□□□ 0.25
PRKDC-204ENST00000521331 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
PRKDC-204ENST00000521331 HERC2P3Q9BVR0 1158 aa16.61■□□□□ 0.25
PRKDC-204ENST00000521331 ZSWIM4Q9H7M6 989 aa16.61■□□□□ 0.25
PRKDC-204ENST00000521331 INPPL1O15357 1258 aa16.6■□□□□ 0.25
PRKDC-204ENST00000521331 ADH1AP07327 375 aa16.6■□□□□ 0.25
PRKDC-204ENST00000521331 ITGA4P13612 1032 aa16.6■□□□□ 0.25
PRKDC-204ENST00000521331 NBL1P41271 181 aa16.6■□□□□ 0.25
PRKDC-204ENST00000521331 AFF1P51825 1210 aaKnown RBP16.6■□□□□ 0.25
PRKDC-204ENST00000521331 TDGQ13569 410 aa16.6■□□□□ 0.25
PRKDC-204ENST00000521331 MXD4Q14582 209 aaPredicted RBP16.6■□□□□ 0.25
PRKDC-204ENST00000521331 NOTUMQ6P988 496 aa16.6■□□□□ 0.25
PRKDC-204ENST00000521331 CYP26C1Q6V0L0 522 aa16.6■□□□□ 0.25
PRKDC-204ENST00000521331 SLFN12Q8IYM2 578 aa16.6■□□□□ 0.25
PRKDC-204ENST00000521331 HAS1Q92839 578 aa16.6■□□□□ 0.25
PRKDC-204ENST00000521331 RPS6KC1Q96S38 1066 aa16.6■□□□□ 0.25
PRKDC-204ENST00000521331 MTRQ99707 1265 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms