RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 CNGA1P29973 690 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 PRDX5P30044 214 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 GNA15P30679 374 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 TMPOP42166 694 aaKnown RBP4.81□□□□□ -1.64
VPS13B-208ENST00000521037 KCNJ4P48050 445 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 ACLYP53396 1101 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 CHRNEQ04844 493 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 MFSD14CQ5VZR4 134 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 PSRC1Q6PGN9 363 aaPredicted RBP4.81□□□□□ -1.64
VPS13B-208ENST00000521037 KSR2Q6VAB6 950 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 LBX2Q6XYB7 198 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 AGMOQ6ZNB7 445 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 OTOP2Q7RTS6 562 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 C8orf58Q8NAV2 365 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 CRELD1Q96HD1 420 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 FRMD6Q96NE9 622 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 DNAJC2Q99543 621 aaKnown RBP4.81□□□□□ -1.64
VPS13B-208ENST00000521037 MPHOSPH8Q99549 860 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 FSD1Q9BTV5 496 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 TLR9Q9NR96 1032 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 DLL3Q9NYJ7 618 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 ADAM30Q9UKF2 790 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 SUGT1Q9Y2Z0 365 aa4.81□□□□□ -1.64
VPS13B-208ENST00000521037 DMXL2Q8TDJ6 3036 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 SHISA3A0PJX4 238 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 TMEM221A6NGB7 291 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 UPK3BL1B0FP48 263 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 UPK3BL2E5RIL1 263 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 M0R296 226 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 FGBP02675 491 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 KCNA5P22460 613 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 BACE1P56817 501 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 RIPK4P57078 832 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 NKX3-2P78367 333 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 CHAF1AQ13111 956 aaPredicted RBP4.8□□□□□ -1.64
VPS13B-208ENST00000521037 TCTN1Q2MV58 587 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 ADHFE1Q8IWW8 467 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 TMEFF1Q8IYR6 380 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 TSPYL6Q8N831 410 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 ANKS4BQ8N8V4 417 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 GDPD5Q8WTR4 605 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 ARNTL2Q8WYA1 636 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 SIGLEC10Q96LC7 697 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 NOC4LQ9BVI4 516 aaKnown RBP4.8□□□□□ -1.64
VPS13B-208ENST00000521037 CNTD2Q9H8S5 307 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 CAPN10Q9HC96 672 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 USP40Q9NVE5 1235 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 NUDCQ9Y266 331 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.8□□□□□ -1.64
VPS13B-208ENST00000521037 RABGAP1Q9Y3P9 1069 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 ATAD5Q96QE3 1844 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 FLNBO75369 2602 aaKnown RBP4.8□□□□□ -1.64
VPS13B-208ENST00000521037 SMCHD1A6NHR9 2005 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 CEP250Q9BV73 2442 aa4.8□□□□□ -1.64
VPS13B-208ENST00000521037 SYNRGQ9UMZ2 1314 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 ANKRD18BA2A2Z9 1011 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 SLC22A31A6NKX4 558 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 H3BQ06 376 aaPredicted RBP4.79□□□□□ -1.64
VPS13B-208ENST00000521037 PDGFBP01127 241 aaPredicted RBP4.79□□□□□ -1.64
VPS13B-208ENST00000521037 ADORA2AP29274 412 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 AVPR2P30518 371 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 EPHB3P54753 998 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 YBX1P67809 324 aaKnown RBP4.79□□□□□ -1.64
VPS13B-208ENST00000521037 DLX2Q07687 328 aaPredicted RBP4.79□□□□□ -1.64
VPS13B-208ENST00000521037 FEZF2Q8TBJ5 459 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 TBC1D22AQ8WUA7 517 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 CYB5D2Q8WUJ1 264 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 RNF141Q8WVD5 230 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 MAML3Q96JK9 1138 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 C12orf42Q96LP6 360 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 OSBPL5Q9H0X9 879 aaPredicted RBP4.79□□□□□ -1.64
VPS13B-208ENST00000521037 ACBD3Q9H3P7 528 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 XPNPEP3Q9NQH7 507 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 TMOD2Q9NZR1 351 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 GPR160Q9UJ42 338 aa4.79□□□□□ -1.64
VPS13B-208ENST00000521037 DSPP15924 2871 aaKnown RBP4.79□□□□□ -1.64
VPS13B-208ENST00000521037 TENM4Q6N022 2769 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 ASTN1O14525 1302 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 ATG2AQ2TAZ0 1938 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 OR14I1A6ND48 311 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 ARVCFO00192 962 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 N4BP3O15049 544 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 PLIN1O60240 522 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 CELA3BP08861 270 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 ATP2A2P16615 1042 aaKnown RBP4.78□□□□□ -1.64
VPS13B-208ENST00000521037 PTGS1P23219 599 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 CST5P28325 142 aaPredicted RBP4.78□□□□□ -1.64
VPS13B-208ENST00000521037 RPL6Q02878 288 aaKnown RBP4.78□□□□□ -1.64
VPS13B-208ENST00000521037 RBL2Q08999 1139 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 EFEMP1Q12805 493 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 CNGB1Q14028 1251 aaPredicted RBP4.78□□□□□ -1.64
VPS13B-208ENST00000521037 CBX2Q14781 532 aaPredicted RBP4.78□□□□□ -1.64
VPS13B-208ENST00000521037 ACAP1Q15027 740 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 SMAD2Q15796 467 aaKnown RBP4.78□□□□□ -1.64
VPS13B-208ENST00000521037 LRRC24Q50LG9 513 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 TMEM201Q5SNT2 666 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 LMBR1LQ6UX01 489 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 LDHAL6AQ6ZMR3 332 aa4.78□□□□□ -1.64
VPS13B-208ENST00000521037 CATSPERGQ6ZRH7 1159 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms