RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 PPP1R16BQ96T49 567 aa20.08■□□□□ 0.81
VEGFA-222ENST00000520948 OSMRQ99650 979 aa20.08■□□□□ 0.81
VEGFA-222ENST00000520948 C11orf84Q9BUA3 381 aaPredicted RBP20.08■□□□□ 0.81
VEGFA-222ENST00000520948 TIPINQ9BVW5 301 aa20.08■□□□□ 0.81
VEGFA-222ENST00000520948 POLR3FQ9H1D9 316 aaPredicted RBP20.08■□□□□ 0.81
VEGFA-222ENST00000520948 AGO3Q9H9G7 860 aaKnown RBP20.08■□□□□ 0.81
VEGFA-222ENST00000520948 POLD4Q9HCU8 107 aa20.08■□□□□ 0.81
VEGFA-222ENST00000520948 TTC3P53804 2025 aa20.08■□□□□ 0.8
VEGFA-222ENST00000520948 A0A087WZ62 844 aa20.07■□□□□ 0.8
VEGFA-222ENST00000520948 DARSP14868 501 aaKnown RBP20.07■□□□□ 0.8
VEGFA-222ENST00000520948 EIF4BP23588 611 aaKnown RBP20.07■□□□□ 0.8
VEGFA-222ENST00000520948 CD52P31358 61 aa20.07■□□□□ 0.8
VEGFA-222ENST00000520948 FAM102BQ5T8I3 360 aa20.07■□□□□ 0.8
VEGFA-222ENST00000520948 IFNLR1Q8IU57 520 aaPredicted RBP20.07■□□□□ 0.8
VEGFA-222ENST00000520948 TMEM87AQ8NBN3 555 aa20.07■□□□□ 0.8
VEGFA-222ENST00000520948 ZNF668Q96K58 619 aaPredicted RBP20.07■□□□□ 0.8
VEGFA-222ENST00000520948 FDXACB1Q9BRP7 624 aaPredicted RBP20.07■□□□□ 0.8
VEGFA-222ENST00000520948 CUEDC2Q9H467 287 aa20.07■□□□□ 0.8
VEGFA-222ENST00000520948 KCNH3Q9ULD8 1083 aa20.07■□□□□ 0.8
VEGFA-222ENST00000520948 NOC2LQ9Y3T9 749 aaKnown RBP20.07■□□□□ 0.8
VEGFA-222ENST00000520948 A0A1B0GVL5 298 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 POLR2DO15514 142 aaKnown RBP20.06■□□□□ 0.8
VEGFA-222ENST00000520948 HIP1RO75146 1068 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 SSBP05455 408 aaKnown RBP eCLIP20.06■□□□□ 0.8
VEGFA-222ENST00000520948 RB1P06400 928 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 PFKFB1P16118 471 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 HOXD11P31277 338 aaPredicted RBP20.06■□□□□ 0.8
VEGFA-222ENST00000520948 GTF2F1P35269 517 aaKnown RBP eCLIP20.06■□□□□ 0.83e-11■■■■■ 42.3
VEGFA-222ENST00000520948 LTBRP36941 435 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 STAT6P42226 847 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 ZP2Q05996 745 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 DLX2Q07687 328 aaPredicted RBP20.06■□□□□ 0.8
VEGFA-222ENST00000520948 HYAL1Q12794 435 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 CAPSQ13938 189 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 GIT2Q14161 759 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 SV2BQ7L1I2 683 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 GPBP1Q86WP2 473 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 IQUBQ8NA54 791 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 BSNDQ8WZ55 320 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 KIFAP3Q92845 792 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 NFKBIZQ9BYH8 718 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 ALG13Q9NP73 1137 aaKnown RBP20.06■□□□□ 0.8
VEGFA-222ENST00000520948 KBTBD4Q9NVX7 518 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 PADI3Q9ULW8 664 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 RWDD3Q9Y3V2 267 aa20.06■□□□□ 0.8
VEGFA-222ENST00000520948 ARIH1Q9Y4X5 557 aaPredicted RBP20.06■□□□□ 0.8
VEGFA-222ENST00000520948 NPHP3-ACAD11A0A0J9YXS1 232 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 PRR33A8MZF0 331 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 DGKIO75912 1065 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 SRGAP2CP0DJJ0 459 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 PTENP60484 403 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 DHX8Q14562 1220 aaKnown RBP20.05■□□□□ 0.8
VEGFA-222ENST00000520948 FAM43BQ6ZT52 329 aaPredicted RBP20.05■□□□□ 0.8
VEGFA-222ENST00000520948 FAM228AQ86W67 206 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 RNF149Q8NC42 400 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 NLRP7Q8WX94 980 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 CLP1Q92989 425 aaKnown RBP20.05■□□□□ 0.8
VEGFA-222ENST00000520948 ZNF689Q96CS4 500 aaPredicted RBP20.05■□□□□ 0.8
VEGFA-222ENST00000520948 GCOM2Q9BZD3 368 aaPredicted RBP20.05■□□□□ 0.8
VEGFA-222ENST00000520948 LMAN2LQ9H0V9 348 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 GOLPH3LQ9H4A5 285 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 IGFLR1Q9H665 355 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 ERVK-5Q9HDB9 667 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 ODF2LQ9ULJ1 636 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 FAM50BQ9Y247 325 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 GINS2Q9Y248 185 aa20.05■□□□□ 0.8
VEGFA-222ENST00000520948 MRPL42Q9Y6G3 142 aaKnown RBP20.05■□□□□ 0.8
VEGFA-222ENST00000520948 MYMKA6NI61 221 aa20.04■□□□□ 0.8
VEGFA-222ENST00000520948 RPS6KA5O75582 802 aa20.04■□□□□ 0.8
VEGFA-222ENST00000520948 ALADP13716 330 aa20.04■□□□□ 0.8
VEGFA-222ENST00000520948 IBSPP21815 317 aaPredicted RBP20.04■□□□□ 0.8
VEGFA-222ENST00000520948 NDUFA8P51970 172 aa20.04■□□□□ 0.8
VEGFA-222ENST00000520948 PAN2Q504Q3 1202 aaKnown RBP20.04■□□□□ 0.8
VEGFA-222ENST00000520948 SRGAP1Q7Z6B7 1085 aa20.04■□□□□ 0.8
VEGFA-222ENST00000520948 RTN4RL1Q86UN2 441 aaPredicted RBP20.04■□□□□ 0.8
VEGFA-222ENST00000520948 DHX58Q96C10 678 aa20.04■□□□□ 0.8
VEGFA-222ENST00000520948 DNAJC19Q96DA6 116 aa20.04■□□□□ 0.8
VEGFA-222ENST00000520948 NLRP4Q96MN2 994 aa20.04■□□□□ 0.8
VEGFA-222ENST00000520948 REEP2Q9BRK0 252 aa20.04■□□□□ 0.8
VEGFA-222ENST00000520948 PYM1Q9BRP8 204 aaKnown RBP20.04■□□□□ 0.8
VEGFA-222ENST00000520948 NTPCRQ9BSD7 190 aaKnown RBP20.04■□□□□ 0.8
VEGFA-222ENST00000520948 INO80BQ9C086 356 aaPredicted RBP20.04■□□□□ 0.8
VEGFA-222ENST00000520948 MINDY3Q9H8M7 445 aa20.04■□□□□ 0.8
VEGFA-222ENST00000520948 C17orf75Q9HAS0 396 aa20.04■□□□□ 0.8
VEGFA-222ENST00000520948 SFI1A8K8P3 1242 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 LINC01565O15544 149 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 DCXO43602 365 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 ACTN4O43707 911 aaKnown RBP20.03■□□□□ 0.8
VEGFA-222ENST00000520948 TBX10O75333 385 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 CSDE1O75534 798 aaKnown RBP20.03■□□□□ 0.8
VEGFA-222ENST00000520948 NAMPTP43490 491 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 ZNF131P52739 623 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 RAD51AP2Q09MP3 1159 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 TFDP1Q14186 410 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 CSPP1Q1MSJ5 1256 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 CTC1Q2NKJ3 1217 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 FSIP1Q8NA03 581 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 MRPS27Q92552 414 aaKnown RBP20.03■□□□□ 0.8
VEGFA-222ENST00000520948 DRC1Q96MC2 740 aa20.03■□□□□ 0.8
VEGFA-222ENST00000520948 TNMDQ9H2S6 317 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms