RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 GRK2P25098 689 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 RPL13P26373 211 aaKnown RBP7.53□□□□□ -1.2
PABPC1-216ENST00000520868 THBS2P35442 1172 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 GRK3P35626 688 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 MAP2K2P36507 400 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 STAT5AP42229 794 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 ITGA1P56199 1179 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 RBL2Q08999 1139 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 SPIRE1Q08AE8 756 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 KIAA2012Q0VF49 1180 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 TNIP1Q15025 636 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 NTRK3Q16288 839 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 CR1LQ2VPA4 569 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 HSP90AB3PQ58FF7 597 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 YOD1Q5VVQ6 348 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-216ENST00000520868 DLK2Q6UY11 383 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 STK32CQ86UX6 486 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 SCUBE1Q8IWY4 988 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 CXorf38Q8TB03 319 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 RTFDC1Q9BY42 306 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-216ENST00000520868 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
PABPC1-216ENST00000520868 CNOT7Q9UIV1 285 aaKnown RBP7.53□□□□□ -1.2
PABPC1-216ENST00000520868 NUP98P52948 1817 aa7.52□□□□□ -1.2
PABPC1-216ENST00000520868 YDJCA8MPS7 323 aa7.52□□□□□ -1.21
PABPC1-216ENST00000520868 H7C1D1 291 aa7.52□□□□□ -1.21
PABPC1-216ENST00000520868 GJA9P57773 515 aa7.52□□□□□ -1.21
PABPC1-216ENST00000520868 SUMO1P63165 101 aaKnown RBP7.52□□□□□ -1.21
PABPC1-216ENST00000520868 TCIRG1Q13488 830 aa7.52□□□□□ -1.21
PABPC1-216ENST00000520868 GRAPQ13588 217 aa7.52□□□□□ -1.21
PABPC1-216ENST00000520868 KRT24Q2M2I5 525 aa7.52□□□□□ -1.21
PABPC1-216ENST00000520868 NT5DC1Q5TFE4 455 aa7.52□□□□□ -1.21
PABPC1-216ENST00000520868 KCNT2Q6UVM3 1135 aa7.52□□□□□ -1.21
PABPC1-216ENST00000520868 ZBTB38Q8NAP3 1195 aaPredicted RBP7.52□□□□□ -1.21
PABPC1-216ENST00000520868 ARRDC4Q8NCT1 418 aa7.52□□□□□ -1.21
PABPC1-216ENST00000520868 GRAPLQ8TC17 118 aaPredicted RBP7.52□□□□□ -1.21
PABPC1-216ENST00000520868 ALG1Q9BT22 464 aa7.52□□□□□ -1.21
PABPC1-216ENST00000520868 JAM3Q9BX67 310 aa7.52□□□□□ -1.21
PABPC1-216ENST00000520868 PGAP2Q9UHJ9 254 aa7.52□□□□□ -1.21
PABPC1-216ENST00000520868 LAS1LQ9Y4W2 734 aaKnown RBP7.52□□□□□ -1.21
PABPC1-216ENST00000520868 PRICKLE3O43900 615 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-216ENST00000520868 ADCY3O60266 1144 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 SYN1P17600 705 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 TMPOP42166 694 aaKnown RBP7.51□□□□□ -1.21
PABPC1-216ENST00000520868 HUNKP57058 714 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 LONRF2Q1L5Z9 754 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 TBC1D10BQ4KMP7 808 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-216ENST00000520868 OTOP3Q7RTS5 596 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 MAMDC2Q7Z304 686 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-216ENST00000520868 TTLL11Q8NHH1 800 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 PIP4K2CQ8TBX8 421 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 FAM89AQ96GI7 184 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 WRNIP1Q96S55 665 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 KRTAP9-3Q9BYQ3 159 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 DBNDD1Q9H9R9 158 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 PPARGC1AQ9UBK2 798 aaKnown RBP7.51□□□□□ -1.21
PABPC1-216ENST00000520868 ASH2LQ9UBL3 628 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 PFDN2Q9UHV9 154 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 KDM3BQ7LBC6 1761 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 SH3TC1Q8TE82 1336 aa7.51□□□□□ -1.21
PABPC1-216ENST00000520868 TRBV23-1A0A0A0MS06 115 aa7.5□□□□□ -1.21
PABPC1-216ENST00000520868 FAM47E-STBD1D6RA91 191 aa7.5□□□□□ -1.21
PABPC1-216ENST00000520868 PSMD14O00487 310 aa7.5□□□□□ -1.21
PABPC1-216ENST00000520868 AQP7O14520 342 aa7.5□□□□□ -1.21
PABPC1-216ENST00000520868 CYP7B1O75881 506 aa7.5□□□□□ -1.21
PABPC1-216ENST00000520868 GNAT1P11488 350 aa7.5□□□□□ -1.21
PABPC1-216ENST00000520868 SERINC3Q13530 473 aa7.5□□□□□ -1.21
PABPC1-216ENST00000520868 SKOR2Q2VWA4 1001 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-216ENST00000520868 TEPPQ6URK8 271 aa7.5□□□□□ -1.21
PABPC1-216ENST00000520868 CCDC146Q8IYE0 955 aa7.5□□□□□ -1.21
PABPC1-216ENST00000520868 CELF1Q92879 486 aaKnown RBP7.5□□□□□ -1.21
PABPC1-216ENST00000520868 DEPDC7Q96QD5 511 aa7.5□□□□□ -1.21
PABPC1-216ENST00000520868 BABAM1Q9NWV8 329 aa7.5□□□□□ -1.21
PABPC1-216ENST00000520868 HSPBP1Q9NZL4 362 aa7.5□□□□□ -1.21
PABPC1-216ENST00000520868 LAMB4A4D0S4 1761 aa7.5□□□□□ -1.21
PABPC1-216ENST00000520868 DLG5Q8TDM6 1919 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 BLACEA4D250 179 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 CA12O43570 354 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 NOBOXO60393 691 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 SOD2P04179 222 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 NAT1P18440 290 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 RGS19P49795 217 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 GPSM2P81274 684 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 LMOD3Q0VAK6 560 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 NOGQ13253 232 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 ZC3H12BQ5HYM0 836 aaKnown RBP7.49□□□□□ -1.21
PABPC1-216ENST00000520868 FAM26FQ5R3K3 315 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 ZFYVE27Q5T4F4 411 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 KRT26Q7Z3Y9 468 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 ZNF761Q86XN6 746 aaPredicted RBP7.49□□□□□ -1.21
PABPC1-216ENST00000520868 ADAMTS17Q8TE56 1095 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 DPF2Q92785 391 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 PTPRN2Q92932 1015 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 CLIC6Q96NY7 704 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 TMEM209Q96SK2 561 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 CHPF2Q9P2E5 772 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 POLLQ9UGP5 575 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 CDHR2Q9BYE9 1310 aa7.49□□□□□ -1.21
PABPC1-216ENST00000520868 ADM5C9JUS6 153 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 CHL1O00533 1208 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 ECE2O60344 883 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms