RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ADAM2Q99965 735 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 BCO2Q9BYV7 579 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 OSBPL6Q9BZF3 934 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 FAM49AQ9H0Q0 323 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-207ENST00000520168 ZBP1Q9H171 429 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 CPVLQ9H3G5 476 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 TMX1Q9H3N1 280 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 AZI2Q9H6S1 392 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 ARHGEF3Q9NR81 526 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 SLC2A4RGQ9NR83 387 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 SH2B1Q9NRF2 756 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-207ENST00000520168 ZSCAN32Q9NX65 697 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 EPS15L1Q9UBC2 864 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 CDH22Q9UJ99 828 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 USP18Q9UMW8 372 aa5.6□□□□□ -1.51
SDCBP-207ENST00000520168 SMG5Q9UPR3 1016 aaKnown RBP5.6□□□□□ -1.51
SDCBP-207ENST00000520168 SUPT16HQ9Y5B9 1047 aaKnown RBP5.6□□□□□ -1.51
SDCBP-207ENST00000520168 ZFP37Q9Y6Q3 630 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-207ENST00000520168 COL1A2P08123 1366 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 DCDC2BA2VCK2 349 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 TTLL8A6PVC2 850 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 LILRB5O75023 590 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 CXCL14O95715 111 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 C1RP00736 705 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 FGAP02671 866 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 DCNP07585 359 aaKnown RBP5.59□□□□□ -1.51
SDCBP-207ENST00000520168 WEE2P0C1S8 567 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 CTSAP10619 480 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 INSRRP14616 1297 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 ZSCAN20P17040 1043 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-207ENST00000520168 FSHRP23945 695 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 MARK3P27448 753 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 NRLP54845 237 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 MFAP1P55081 439 aaKnown RBP5.59□□□□□ -1.51
SDCBP-207ENST00000520168 STARD6P59095 220 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 IGBP1P78318 339 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 SEMA3FQ13275 785 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 PPP2R5DQ14738 602 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 PTPN14Q15678 1187 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 SPECC1Q5M775 1068 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 DCLRE1AQ6PJP8 1040 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 RSPO2Q6UXX9 243 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-207ENST00000520168 TMC5Q6UXY8 1006 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 PLPPR4Q7Z2D5 763 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 DDX53Q86TM3 631 aaKnown RBP5.59□□□□□ -1.51
SDCBP-207ENST00000520168 FCHSD1Q86WN1 690 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 VPS52Q8N1B4 723 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 SLC39A11Q8N1S5 342 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 PANK1Q8TE04 598 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 CUL5Q93034 780 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 CASD1Q96PB1 797 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 EMILIN2Q9BXX0 1053 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 BCAS3Q9H6U6 928 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.59□□□□□ -1.51
SDCBP-207ENST00000520168 RAB23Q9ULC3 237 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 CA14Q9ULX7 337 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 ST3GAL5Q9UNP4 418 aa5.59□□□□□ -1.51
SDCBP-207ENST00000520168 BAZ2BQ9UIF8 2168 aaKnown RBP5.59□□□□□ -1.52
SDCBP-207ENST00000520168 SETXQ7Z333 2677 aaKnown RBP5.59□□□□□ -1.52
SDCBP-207ENST00000520168 SMG1Q96Q15 3661 aaKnown RBP5.59□□□□□ -1.52
SDCBP-207ENST00000520168 DMXL2Q8TDJ6 3036 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 TDRD15B5MCY1 1934 aaKnown RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 LAMA5O15230 3695 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 GCN1Q92616 2671 aaKnown RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 CLUHO75153 1309 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 CEP295Q9C0D2 2601 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 GSTTP1A0A1W2PQM5 241 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 KANSL1LA0AUZ9 987 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 KLRF2D3W0D1 207 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 PIK3CDO00329 1044 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 NCAM2O15394 837 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 NARSO43776 548 aaKnown RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 SMARCA5O60264 1052 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 MGEA5O60502 916 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 FGFR1P11362 822 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 KCNA2P16389 499 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 EPCAMP16422 314 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 GBP2P32456 591 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 CLCN4P51793 760 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 CRYBB1P53674 252 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 HNRNPUQ00839 825 aaKnown RBP eCLIP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 SP4Q02446 784 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 PTSQ03393 145 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 PRKCQQ04759 706 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 TMEM62Q0P6H9 643 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 TMEM266Q2M3C6 531 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 TUSC1Q2TAM9 212 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 MCMDC2Q4G0Z9 681 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 VPS53Q5VIR6 699 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 LAIR1Q6GTX8 287 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 MTHFD1LQ6UB35 978 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 LRRC55Q6ZSA7 311 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 CCDC116Q8IYX3 515 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 MAML2Q8IZL2 1156 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 SLC44A3Q8N4M1 653 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 C12orf76Q8N812 135 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 SMARCC2Q8TAQ2 1214 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 PI4K2BQ8TCG2 481 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 SLC22A17Q8WUG5 538 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 NANOS1Q8WY41 292 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms