RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 ALPPL2P10696 532 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 LIG1P18858 919 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 KLRC1P26715 233 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 PSMA5P28066 241 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CTGFP29279 349 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CDC25CP30307 473 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 FOSBP53539 338 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 RPL10AP62906 217 aaKnown RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CCINQ13939 588 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 ARID5BQ14865 1188 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 EOGTQ5NDL2 527 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 SH3BP5LQ7L8J4 393 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 HEATR3Q7Z4Q2 680 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 GPR149Q86SP6 731 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 ZNF410Q86VK4 478 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 METTL16Q86W50 562 aaKnown RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 MRPL43Q8N983 215 aaKnown RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CCDC150Q8NCX0 1101 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 SCFD1Q8WVM8 642 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 PIBF1Q8WXW3 757 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 HVCN1Q96D96 273 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 NXPE2Q96DL1 559 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 BICD1Q96G01 975 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 FLRT1Q9NZU1 646 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 NCKAP1Q9Y2A7 1128 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 ASB3Q9Y575 518 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 PCDHA10Q9Y5I2 948 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 AHCTF1Q8WYP5 2266 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 BCORQ6W2J9 1755 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 COL1A2P08123 1366 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 DFNA5O60443 496 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 APBB3O95704 486 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CYBBP04839 570 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CTSAP10619 480 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 MYL4P12829 197 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 INSRRP14616 1297 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 SLC16A2P36021 539 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 HTRA4P83105 476 aaPredicted RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 ZNF543Q08ER8 600 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 XKR3Q5GH77 459 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 C6orf118Q5T5N4 469 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 TMEM164Q5U3C3 297 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 SRGAP1Q7Z6B7 1085 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 SMRP1Q8NCR6 262 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CCDC112Q8NEF3 446 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CPLX3Q8WVH0 158 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 NXF1Q9UBU9 619 aaKnown RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 RNASEH1O60930 286 aaKnown RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 NFATC1O95644 943 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CAVIN2O95810 425 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 KRT19P08727 400 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 HMGB1P09429 215 aaKnown RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 DESP17661 470 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 TCF7P36402 384 aaPredicted RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CASP7P55210 303 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 MXD4Q14582 209 aaPredicted RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 PDGFRLQ15198 375 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 LPAL2Q16609 132 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 LETM2Q2VYF4 491 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 GDF6Q6KF10 455 aaPredicted RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 ASCL5Q7RTU5 278 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 COLGALT1Q8NBJ5 622 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 REPS2Q8NFH8 660 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 SYTL5Q8TDW5 730 aaPredicted RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 SSH3Q8TE77 659 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 LENG1Q96BZ8 264 aaPredicted RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 TPX2Q9ULW0 747 aaKnown RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 GNEQ9Y223 722 aaKnown RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CCDC195A0A1B0GUA6 201 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 AP5Z1O43299 807 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 SLC28A2O43868 658 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 ORC4O43929 436 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 UQCRHP07919 91 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 GDI1P31150 447 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 ARRB1P49407 418 aaPredicted RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 ATXN1P54253 815 aaKnown RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 NUCB2P80303 420 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 NFE2Q16621 373 aaPredicted RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 RASGRP2Q7LDG7 609 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 LRP10Q7Z4F1 713 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 TADA2BQ86TJ2 420 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 LCORLQ8N3X6 602 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CCDC127Q96BQ5 260 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 NLRP4Q96MN2 994 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 LGMNQ99538 433 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CYP4F11Q9HBI6 524 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 PIH1D3Q9NQM4 214 aaKnown RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 TYW1Q9NV66 732 aaKnown RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 SEPT11Q9NVA2 429 aaKnown RBP3.16□□□□□ -1.9
EFR3A-202ENST00000519656 SLC6A14Q9UN76 642 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 PCDHA2Q9Y5H9 948 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 WNK3Q9BYP7 1800 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 DNAJC25-GNG10A0A024R161 153 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 CCDC163A0A0D9SF12 145 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 ZNF286BP0CG31 522 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 NFKBIAP25963 317 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 HOXD12P35452 270 aa3.16□□□□□ -1.9
EFR3A-202ENST00000519656 ST8SIA6P61647 398 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms