RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 ANKEF1Q9NU02 776 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 TDRD15B5MCY1 1934 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 LOC730098B7Z3J9 87 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 NEMFO60524 1076 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 JAK2O60674 1132 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 OFD1O75665 1012 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 BRD1O95696 1058 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 HOXB8P17481 243 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 RBM10P98175 930 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 POU5F1BQ06416 359 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 MXD4Q14582 209 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 CBX2Q14781 532 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 ANKRD54Q6NXT1 300 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 MRPL43Q8N983 215 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 CNNM3Q8NE01 707 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 SUSD6Q92537 303 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 CASP10Q92851 521 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 MINDY3Q9H8M7 445 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 TBC1D13Q9NVG8 400 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 PCDHB2Q9Y5E7 798 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 CNTNAP2Q9UHC6 1331 aa13.86□□□□□ -0.19
TRAPPC9-206ENST00000519482 C2orf71A6NGG8 1288 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 NT5C1B-RDH14C9J2C7 533 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 ZBTB39O15060 712 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 ZC3H11AO75152 810 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 DGAT1O75907 488 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 XRCC6P12956 609 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 AXLP30530 894 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 TECP42680 631 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 TXKP42681 527 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 RNASELQ05823 741 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 GIT2Q14161 759 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 TFDP1Q14186 410 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 SAFBQ15424 915 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 IFNLR1Q8IU57 520 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 RNF149Q8NC42 400 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 URGCPQ8TCY9 931 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 IGSF21Q96ID5 467 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 MTMR9Q96QG7 549 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 S1PR5Q9H228 398 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 NRDE2Q9H7Z3 1164 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 XPNPEP1Q9NQW7 623 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 BMP2KQ9NSY1 1161 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 KANSL3Q9P2N6 904 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 STK39Q9UEW8 545 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 MUTYHQ9UIF7 546 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 SMC3Q9UQE7 1217 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 INPP5FQ9Y2H2 1132 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 IRAK3Q9Y616 596 aa13.85□□□□□ -0.19
TRAPPC9-206ENST00000519482 TRIOO75962 3097 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 MEIS3P2A8K0S8 358 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 ERLIN2O94905 339 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 CXCL14O95715 111 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 GALTP07902 379 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 PDCP20941 246 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 HOXA11P31270 313 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 PTENP60484 403 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 NCBP1Q09161 790 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 ST3GAL1Q11201 340 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 LONRF3Q496Y0 759 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 UBXN11Q5T124 520 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 LLGL2Q6P1M3 1020 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 SYCE2Q6PIF2 218 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 AGMOQ6ZNB7 445 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 DDX53Q86TM3 631 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 EDAQ92838 391 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 CCDC51Q96ER9 411 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 CCDC43Q96MW1 224 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 LLPHQ9BRT6 129 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 ZBP1Q9H171 429 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 RSAD1Q9HA92 442 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 UBN1Q9NPG3 1134 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 ATP6V1DQ9Y5K8 247 aa13.84□□□□□ -0.19
TRAPPC9-206ENST00000519482 WNT7AO00755 349 aa13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 CLASP2O75122 1294 aaKnown RBP13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 CTSAP10619 480 aa13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 NCLP19338 710 aaKnown RBP13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 RARRES1P49788 294 aa13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 ORC2Q13416 577 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 TPRNQ4KMQ1 711 aa13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 TMEM173Q86WV6 379 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 VPS52Q8N1B4 723 aa13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 TMEM175Q9BSA9 504 aa13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 NFKBIZQ9BYH8 718 aa13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 DNAJB4Q9UDY4 337 aa13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 HCFC2Q9Y5Z7 792 aa13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 TECTAO75443 2155 aa13.83□□□□□ -0.2
TRAPPC9-206ENST00000519482 MUC6Q6W4X9 2439 aa13.82□□□□□ -0.2
TRAPPC9-206ENST00000519482 ZNF318Q5VUA4 2279 aa13.82□□□□□ -0.2
TRAPPC9-206ENST00000519482 TSPAN1O60635 241 aa13.82□□□□□ -0.2
TRAPPC9-206ENST00000519482 ALDH2P05091 517 aa13.82□□□□□ -0.2
TRAPPC9-206ENST00000519482 ITGA4P13612 1032 aa13.82□□□□□ -0.2
TRAPPC9-206ENST00000519482 CA8P35219 290 aa13.82□□□□□ -0.2
TRAPPC9-206ENST00000519482 ARL2P36404 184 aa13.82□□□□□ -0.2
TRAPPC9-206ENST00000519482 SLC11A1P49279 550 aa13.82□□□□□ -0.2
TRAPPC9-206ENST00000519482 FOSBP53539 338 aa13.82□□□□□ -0.2
TRAPPC9-206ENST00000519482 ITIH3Q06033 890 aa13.82□□□□□ -0.2
TRAPPC9-206ENST00000519482 CAPSQ13938 189 aa13.82□□□□□ -0.2
TRAPPC9-206ENST00000519482 CES5AQ6NT32 575 aa13.82□□□□□ -0.2
TRAPPC9-206ENST00000519482 NOTUMQ6P988 496 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms