RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 TRAIPQ9BWF2 469 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 APOL5Q9BWW9 433 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 C1QTNF1Q9BXJ1 281 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 EPHX3Q9H6B9 360 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 CD320Q9NPF0 282 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 TBC1D13Q9NVG8 400 aa11.74□□□□□ -0.53
SPIDR-205ENST00000518060 FSD2A1L4K1 749 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 FAM86C2PA6NEL3 165 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 HIDE1A8MVS5 230 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 FSCN2O14926 492 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 OFD1O75665 1012 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 GLP2RO95838 553 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 POMCP01189 267 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 SPATA31C1P0DKV0 1188 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 ARL2P36404 184 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 ZP2Q05996 745 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 MBTD1Q05BQ5 628 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 ZRSR1Q15695 479 aaKnown RBP11.73□□□□□ -0.53
SPIDR-205ENST00000518060 FNDC1Q4ZHG4 1894 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-205ENST00000518060 UBXN11Q5T124 520 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 PADI6Q6TGC4 694 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 ZBTB8OSQ8IWT0 167 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 HACE1Q8IYU2 909 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 VPS52Q8N1B4 723 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 DEPTORQ8TB45 409 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 SNX29Q8TEQ0 813 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 RSPH1Q8WYR4 309 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 CCDC51Q96ER9 411 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 POP1Q99575 1024 aaKnown RBP11.73□□□□□ -0.53
SPIDR-205ENST00000518060 POLR3CQ9BUI4 534 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-205ENST00000518060 EIF2AQ9BY44 585 aaKnown RBP11.73□□□□□ -0.53
SPIDR-205ENST00000518060 RAB34Q9BZG1 259 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 NRDE2Q9H7Z3 1164 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 NGRNQ9NPE2 291 aaKnown RBP11.73□□□□□ -0.53
SPIDR-205ENST00000518060 CLEC1BQ9P126 229 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 LRWD1Q9UFC0 647 aa11.73□□□□□ -0.53
SPIDR-205ENST00000518060 CNTNAP2Q9UHC6 1331 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-205ENST00000518060 SPDYE4A6NLX3 237 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 B4GALT5O43286 388 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 ZNF623O75123 536 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 CD2BP2O95400 341 aaKnown RBP11.72□□□□□ -0.53
SPIDR-205ENST00000518060 NPTXRO95502 500 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 SSBP05455 408 aaKnown RBP eCLIP11.72□□□□□ -0.53
SPIDR-205ENST00000518060 XRCC6P12956 609 aaKnown RBP eCLIP11.72□□□□□ -0.53
SPIDR-205ENST00000518060 RPA1P27694 616 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 GJB2P29033 226 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 AXLP30530 894 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 HOXA11P31270 313 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-205ENST00000518060 MLH1P40692 756 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 SLC11A1P49279 550 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 PTGDRQ13258 359 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 PCBP1Q15365 356 aaKnown RBP eCLIP11.72□□□□□ -0.53
SPIDR-205ENST00000518060 SMAD2Q15796 467 aaKnown RBP11.72□□□□□ -0.53
SPIDR-205ENST00000518060 AGMOQ6ZNB7 445 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 TMEM173Q86WV6 379 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-205ENST00000518060 CDR2LQ86X02 465 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-205ENST00000518060 ADHFE1Q8IWW8 467 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 CNNM3Q8NE01 707 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 VN1R2Q8NFZ6 395 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 KHSRPQ92945 711 aaKnown RBP eCLIP11.72□□□□□ -0.53
SPIDR-205ENST00000518060 CSRNP2Q9H175 543 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 UBN1Q9NPG3 1134 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 DNAJB4Q9UDY4 337 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 PRKAG3Q9UGI9 489 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 DBR1Q9UK59 544 aaKnown RBP11.72□□□□□ -0.53
SPIDR-205ENST00000518060 SMC3Q9UQE7 1217 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 PRG3Q9Y2Y8 225 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-205ENST00000518060 USP15Q9Y4E8 981 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-205ENST00000518060 HES2Q9Y543 173 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 IPPQ9Y573 584 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 PCDHB6Q9Y5E3 794 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 GTF3C3Q9Y5Q9 886 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 PLXNA4Q9HCM2 1894 aa11.72□□□□□ -0.53
SPIDR-205ENST00000518060 MUC3AQ02505 3323 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 ATG2AQ2TAZ0 1938 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 CARNS1A5YM72 827 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 CXCL14O95715 111 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 GALTP07902 379 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 ARF4P18085 180 aaPredicted RBP11.71□□□□□ -0.53
SPIDR-205ENST00000518060 NCLP19338 710 aaKnown RBP11.71□□□□□ -0.53
SPIDR-205ENST00000518060 COL9A1P20849 921 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 U2AF2P26368 475 aaKnown RBP eCLIP11.71□□□□□ -0.53
SPIDR-205ENST00000518060 OR1G1P47890 313 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 MCM2P49736 904 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.53
SPIDR-205ENST00000518060 TMEM31Q5JXX7 168 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 KRT79Q5XKE5 535 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 ZNF280BQ86YH2 543 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 SMRP1Q8NCR6 262 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 BCL7CQ8WUZ0 217 aaPredicted RBP11.71□□□□□ -0.53
SPIDR-205ENST00000518060 AUTS2Q8WXX7 1259 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 IGSF21Q96ID5 467 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 MSLNLQ96KJ4 702 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 GAD1Q99259 594 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 BHMT2Q9H2M3 363 aa11.71□□□□□ -0.53
SPIDR-205ENST00000518060 NXF3Q9H4D5 531 aaKnown RBP11.71□□□□□ -0.53
SPIDR-205ENST00000518060 DDX19AQ9NUU7 478 aaKnown RBP11.71□□□□□ -0.53
SPIDR-205ENST00000518060 PRMT7Q9NVM4 692 aaPredicted RBP11.71□□□□□ -0.53
SPIDR-205ENST00000518060 KANSL3Q9P2N6 904 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms