RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 MRPL11Q9Y3B7 192 aaKnown RBP6.53□□□□□ -1.36
LINC00535-202ENST00000517785 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.53□□□□□ -1.36
LINC00535-202ENST00000517785 EVPLQ92817 2033 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 NRCAMQ92823 1304 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 C2orf71A6NGG8 1288 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 PRR5-ARHGAP8B1AHC4 643 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 MYBP10242 640 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 BMP4P12644 408 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 LAG3P18627 525 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 NCLP19338 710 aaKnown RBP6.52□□□□□ -1.37
LINC00535-202ENST00000517785 SDHBP21912 280 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 COL8A1P27658 744 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 CCND2P30279 289 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 ARHGAP8P85298 464 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 LMNB2Q03252 620 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 SEMA3FQ13275 785 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 SMC1AQ14683 1233 aaKnown RBP6.52□□□□□ -1.37
LINC00535-202ENST00000517785 MARCH8Q5T0T0 291 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 VPS53Q5VIR6 699 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 KCNV1Q6PIU1 500 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 METTL7BQ6UX53 244 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 CCDC149Q6ZUS6 474 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 VSIG10LQ86VR7 867 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 GOLGA6L1Q8N7Z2 621 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 GPR152Q8TDT2 470 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 TRAPPC12Q8WVT3 735 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 ABHD17AQ96GS6 310 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 PPP1R16BQ96T49 567 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 CRISPLD1Q9H336 500 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 RTEL1Q9NZ71 1219 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 DLGAP2Q9P1A6 1054 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 ANGPTL2Q9UKU9 493 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 LZTS1Q9Y250 596 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 USTQ9Y2C2 406 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 SIT1Q9Y3P8 196 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 TRPV2Q9Y5S1 764 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 PATJQ8NI35 1801 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 SPEGQ15772 3267 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 DOCK6Q96HP0 2047 aa6.52□□□□□ -1.37
LINC00535-202ENST00000517785 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.51□□□□□ -1.37
LINC00535-202ENST00000517785 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.51□□□□□ -1.37
LINC00535-202ENST00000517785 DENND3A2RUS2 1198 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 NT5C1B-RDH14C9J2C7 533 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 M0QZ92 97 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 ORC4O43929 436 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 BNIP3LO60238 219 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 N4BP1O75113 896 aaKnown RBP6.51□□□□□ -1.37
LINC00535-202ENST00000517785 RAB11FIP3O75154 756 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 HMMRO75330 724 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 ZFYP08048 801 aaPredicted RBP6.51□□□□□ -1.37
LINC00535-202ENST00000517785 SNHG28P0DPA3 235 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 HOXB4P17483 251 aaPredicted RBP6.51□□□□□ -1.37
LINC00535-202ENST00000517785 FGFR3P22607 806 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 GBP2P32456 591 aaPredicted RBP6.51□□□□□ -1.37
LINC00535-202ENST00000517785 TCF7P36402 384 aaPredicted RBP6.51□□□□□ -1.37
LINC00535-202ENST00000517785 HSD17B4P51659 736 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 HAND2P61296 217 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 CTBSQ01459 385 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 PLCB3Q01970 1234 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 CSTF1Q05048 431 aaKnown RBP6.51□□□□□ -1.37
LINC00535-202ENST00000517785 SPEM2Q0P670 501 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 TLR1Q15399 786 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 TSSK4Q6SA08 328 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 KCNT2Q6UVM3 1135 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 LRRC55Q6ZSA7 311 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 OTOP3Q7RTS5 596 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 CABP7Q86V35 215 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 TMEM87AQ8NBN3 555 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 SECISBP2LQ93073 1101 aaKnown RBP6.51□□□□□ -1.37
LINC00535-202ENST00000517785 ZNF558Q96NG5 402 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 ADAM2Q99965 735 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 ARHGEF3Q9NR81 526 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 ECHDC1Q9NTX5 307 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 SPATA6Q9NWH7 488 aaPredicted RBP6.51□□□□□ -1.37
LINC00535-202ENST00000517785 WNT16Q9UBV4 365 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 PCDHA1Q9Y5I3 950 aa6.51□□□□□ -1.37
LINC00535-202ENST00000517785 IGSF9BQ9UPX0 1349 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 ZZEF1O43149 2961 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 MBLAC1A4D2B0 266 aaPredicted RBP6.5□□□□□ -1.37
LINC00535-202ENST00000517785 PPP1R11O60927 126 aaPredicted RBP6.5□□□□□ -1.37
LINC00535-202ENST00000517785 CXCL14O95715 111 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 TGFB3P10600 412 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 TGM1P22735 817 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 METAP2P50579 478 aaKnown RBP eCLIP6.5□□□□□ -1.37
LINC00535-202ENST00000517785 MRPS9P82933 396 aaKnown RBP6.5□□□□□ -1.37
LINC00535-202ENST00000517785 KRT17Q04695 432 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 NEDD9Q14511 834 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 GNPTABQ3T906 1256 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 GPATCH4Q5T3I0 446 aaKnown RBP6.5□□□□□ -1.37
LINC00535-202ENST00000517785 IER5Q5VY09 327 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 LINC00114Q6XXX2 140 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 SLCO4C1Q6ZQN7 724 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 STOX1Q6ZVD7 989 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 MRPL43Q8N983 215 aaKnown RBP6.5□□□□□ -1.37
LINC00535-202ENST00000517785 RNF169Q8NCN4 708 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 TMEM40Q8WWA1 233 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 ATRIPQ8WXE1 791 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 GLG1Q92896 1179 aa6.5□□□□□ -1.37
LINC00535-202ENST00000517785 CELF4Q9BZC1 486 aaKnown RBP6.5□□□□□ -1.37
LINC00535-202ENST00000517785 LRRCC1Q9C099 1032 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms