RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 RARS2Q5T160 578 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 PPP4R3AQ6IN85 833 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 KIAA1841Q6NSI8 718 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 GLB1LQ6UWU2 654 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 CATSPER4Q7RTX7 472 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 ZBTB33Q86T24 672 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 UBALD2Q8IYN6 164 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 ZDHHC14Q8IZN3 488 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 FAM177A1Q8N128 213 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 NLRP4Q96MN2 994 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 TM6SF1Q9BZW5 370 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 DHX33Q9H6R0 707 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 MINDY3Q9H8M7 445 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 AGPAT5Q9NUQ2 364 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 FAM86C1Q9NVL1 165 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 DZANK1Q9NVP4 752 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 KCNJ14Q9UNX9 436 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 USTQ9Y2C2 406 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 INPP5FQ9Y2H2 1132 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 PCDHB2Q9Y5E7 798 aa9.36□□□□□ -0.91
CTNNA1-203ENST00000517534 GVINP1Q7Z2Y8 2422 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 CARNS1A5YM72 827 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 CPLX1O14810 134 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 ASGR2P07307 311 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 RAB27AP51159 221 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 MTMR3Q13615 1198 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 GIT2Q14161 759 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 BMS1Q14692 1282 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 LETM2Q2VYF4 491 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 KRT25Q7Z3Z0 450 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 SRGAP1Q7Z6B7 1085 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 TMEM105Q8N8V8 129 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 PRPF31Q8WWY3 499 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 HAS1Q92839 578 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 TMEM143Q96AN5 459 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 PGBD4Q96DM1 585 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 FAM20AQ96MK3 541 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 KLHL5Q96PQ7 755 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 JPH2Q9BR39 696 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 PHF20Q9BVI0 1012 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 GBP3Q9H0R5 595 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 GJB4Q9NTQ9 266 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 RYDENQ9NUL5 291 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 LIMD1Q9UGP4 676 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 COL4A3BPQ9Y5P4 624 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 CYP46A1Q9Y6A2 500 aa9.35□□□□□ -0.91
CTNNA1-203ENST00000517534 MYH9P35579 1960 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 FAM186AA6NE01 2351 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 H0Y858 1186 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 NRP1O14786 923 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 ZBTB39O15060 712 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 GALR2O43603 387 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 ST18O60284 1047 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 DTNBO60941 627 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 EFEMP2O95967 443 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 ALDH2P05091 517 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 P4HBP07237 508 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 CNPP09543 421 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 SRGAP2CP0DJJ0 459 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 CA8P35219 290 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 CLCN4P51793 760 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 RNASELQ05823 741 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 SPIRE1Q08AE8 756 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 LAMTOR4Q0VGL1 99 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 SCRN1Q12765 414 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 STK3Q13188 491 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 EPHA7Q15375 998 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 EARS2Q5JPH6 523 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 TMC5Q6UXY8 1006 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 TAS1R1Q7RTX1 841 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 GPR149Q86SP6 731 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 CABP7Q86V35 215 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 C4orf19Q8IY42 314 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 TDRD5Q8NAT2 981 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 SMG8Q8ND04 991 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 OXER1Q8TDS5 423 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 SLC7A3Q8WY07 619 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 CEP170P1Q96L14 293 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 TMEM175Q9BSA9 504 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 IRF2BPLQ9H1B7 796 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 RSAD1Q9HA92 442 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 RGL1Q9NZL6 768 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 DBR1Q9UK59 544 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 PPME1Q9Y570 386 aa9.34□□□□□ -0.91
CTNNA1-203ENST00000517534 CNTNAP2Q9UHC6 1331 aa9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 PROB1E7EW31 1015 aa9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 TBX3O15119 743 aa9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 INPPL1O15357 1258 aa9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 ASAP2O43150 1006 aa9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 GFRA3O60609 400 aa9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 DKC1O60832 514 aaKnown RBP eCLIP9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 SLITRK3O94933 977 aa9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 GCFC2P16383 781 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 NCLP19338 710 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 RFC5P40937 340 aa9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 AMHR2Q16671 573 aa9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 CPLX2Q6PUV4 134 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 NEK8Q86SG6 692 aa9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 FERMT3Q86UX7 667 aa9.33□□□□□ -0.92
CTNNA1-203ENST00000517534 PPFIBP1Q86W92 1011 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms