RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CENPUQ71F23 418 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 ZC3H18Q86VM9 953 aaKnown RBP7.13□□□□□ -1.27
CPNE3-203ENST00000517490 CCDC24Q8N4L8 307 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 EPS8L3Q8TE67 593 aaKnown RBP7.13□□□□□ -1.27
CPNE3-203ENST00000517490 RSAD2Q8WXG1 361 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 RILPQ96NA2 401 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 PNMA5Q96PV4 448 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 CENPKQ9BS16 269 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 MKNK1Q9BUB5 465 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 MAK16Q9BXY0 300 aaKnown RBP7.13□□□□□ -1.27
CPNE3-203ENST00000517490 RXFP1Q9HBX9 757 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 SAYSD1Q9NPB0 183 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 BLOC1S4Q9NUP1 217 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 ZFATQ9P243 1243 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 SLAIN2Q9P270 581 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 FAM47DPA6NHR8 397 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 SLC37A4O43826 429 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 COILP38432 576 aaPredicted RBP7.12□□□□□ -1.27
CPNE3-203ENST00000517490 LLGL1Q15334 1064 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 RIBC1Q8N443 379 aaPredicted RBP7.12□□□□□ -1.27
CPNE3-203ENST00000517490 DNAJC9Q8WXX5 260 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 FERMT1Q9BQL6 677 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 MRPL47Q9HD33 250 aaKnown RBP7.12□□□□□ -1.27
CPNE3-203ENST00000517490 PKD2L1Q9P0L9 805 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 CNOT8Q9UFF9 292 aaKnown RBP7.12□□□□□ -1.27
CPNE3-203ENST00000517490 RIMBP2O15034 1052 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 EYA4O95677 639 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 POLR2MP0CAP2 368 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 STAT3P40763 770 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 ARHGAP4P98171 946 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 RIPK1Q13546 671 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 NT5DC3Q86UY8 548 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 LONP2Q86WA8 852 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 ADGRF4Q8IZF3 695 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 MIPOL1Q8TD10 442 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.12□□□□□ -1.27
CPNE3-203ENST00000517490 CCDC127Q96BQ5 260 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 ERP27Q96DN0 273 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 FOXP3Q9BZS1 431 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 KIF9Q9HAQ2 790 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 ARHGEF10LQ9HCE6 1279 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 UVRAGQ9P2Y5 699 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 DISP2A7MBM2 1401 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 ARHGAP42A6NI28 874 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 SFI1A8K8P3 1242 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 TXNDC9O14530 226 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 NTSR2O95665 410 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 NUDT17P0C025 328 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 SETSIPP0DME0 302 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 DLATP10515 647 aaKnown RBP7.12□□□□□ -1.27
CPNE3-203ENST00000517490 KCNMA1Q12791 1236 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 TMEM119Q4V9L6 283 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 KIRREL3Q8IZU9 778 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 ATL2Q8NHH9 583 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 NAF1Q96HR8 494 aaKnown RBP7.12□□□□□ -1.27
CPNE3-203ENST00000517490 MAGEB18Q96M61 343 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 RPS6KC1Q96S38 1066 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 ZSWIM1Q9BR11 485 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 REEP2Q9BRK0 252 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 PCIF1Q9H4Z3 704 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 Q9H521 79 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 ANAPC7Q9UJX3 599 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 GTPBP10A4D1E9 387 aaKnown RBP7.12□□□□□ -1.27
CPNE3-203ENST00000517490 USP17L15C9J2P7 530 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 USP17L13C9JLJ4 530 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 USP17L11C9JVI0 530 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 USP17L18D6R9N7 530 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 USP17L22D6RA61 530 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 USP17L17D6RBQ6 530 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 USP17L19D6RCP7 530 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 USP17L20D6RJB6 530 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 DDX39AO00148 427 aaKnown RBP7.12□□□□□ -1.27
CPNE3-203ENST00000517490 IPO5O00410 1097 aaKnown RBP7.12□□□□□ -1.27
CPNE3-203ENST00000517490 TBX3O15119 743 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 MT-ND3P03897 115 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 FGRP09769 529 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 CYP11B2P19099 503 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 USP17L24Q0WX57 530 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 CFAP157Q5JU67 520 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 USP17L6PQ6QN14 398 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 ST13P4Q8IZP2 240 aaPredicted RBP7.12□□□□□ -1.27
CPNE3-203ENST00000517490 SCFD1Q8WVM8 642 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 C1orf54Q8WWF1 131 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 FGD4Q96M96 766 aa7.12□□□□□ -1.27
CPNE3-203ENST00000517490 E7ENQ6 273 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 EIF3DO15371 548 aaKnown RBP eCLIP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 NVLO15381 856 aaKnown RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 DKC1O60832 514 aaKnown RBP eCLIP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 PAEPP09466 180 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 COPB2P35606 906 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 PRKCIP41743 596 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 GTF2IP78347 998 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 ICA1Q05084 483 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 CTTNQ14247 550 aaKnown RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 QPCTQ16769 361 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 CERKLQ49MI3 558 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-203ENST00000517490 NSMFQ6X4W1 530 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 C16orf86Q6ZW13 317 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 DTNBP1Q96EV8 351 aa7.11□□□□□ -1.27
CPNE3-203ENST00000517490 TSNARE1Q96NA8 513 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms