RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 ZFP42Q96MM3 310 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 NLRP4Q96MN2 994 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PAAF1Q9BRP4 392 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 GCOM2Q9BZD3 368 aaPredicted RBP9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 GBP3Q9H0R5 595 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CHST12Q9NRB3 414 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 AGPAT5Q9NUQ2 364 aa9.29□□□□□ -0.92
SCARNA20.3-201ENST00000516913 TPRP12270 2363 aaKnown RBP9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 NRG2O14511 850 aaPredicted RBP9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 NRP1O14786 923 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 TSPAN1O60635 241 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SPATA31D3P0C874 917 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 TMOD1P28289 359 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PPM1AP35813 382 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 ALDH7A1P49419 539 aaKnown RBP9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PTPN5P54829 565 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PSMC5P62195 406 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 FGD1P98174 961 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 DSC1Q08554 894 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SSRP1Q08945 709 aaKnown RBP9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 LETM2Q2VYF4 491 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 TWF2Q6IBS0 349 aaKnown RBP9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 KIAA1841Q6NSI8 718 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SPATA31D4Q6ZUB0 917 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CATSPER4Q7RTX7 472 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 COLGALT2Q8IYK4 626 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 ZDHHC14Q8IZN3 488 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 RDM1Q8NG50 284 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CASP10Q92851 521 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 ZNF274Q96GC6 653 aaPredicted RBP9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 DYDC2Q96IM9 177 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 CPB2Q96IY4 423 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 MYADMQ96S97 322 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 HSD17B14Q9BPX1 270 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 RPP25Q9BUL9 199 aaKnown RBP9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 GPR62Q9BZJ7 368 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 POLD4Q9HCU8 107 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 DDX25Q9UHL0 483 aaKnown RBP9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 PUF60Q9UHX1 559 aaKnown RBP9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 SORCS3Q9UPU3 1222 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 COL4A3BPQ9Y5P4 624 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 ZFHX4Q86UP3 3567 aa9.28□□□□□ -0.92
SCARNA20.3-201ENST00000516913 KRBA1A5PL33 1030 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 INPPL1O15357 1258 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 TEX28O15482 410 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 ADAM12O43184 909 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 HOXA2O43364 376 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 GALR2O43603 387 aaPredicted RBP9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 DEXIO95424 95 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 PAPLNO95428 1278 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 RPL17P18621 184 aaKnown RBP9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 ARL2P36404 184 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 QARSP47897 775 aaKnown RBP9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 CYP4A11Q02928 519 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 KRT17Q04695 432 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 ITIH3Q06033 890 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 ODR4Q5SWX8 454 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 LILRA6Q6PI73 481 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 MOXD1Q6UVY6 613 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 CD300LGQ6UXG3 332 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 FAM43BQ6ZT52 329 aaPredicted RBP9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 PIK3AP1Q6ZUJ8 805 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 FERMT3Q86UX7 667 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 ZNF410Q86VK4 478 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 ABI1Q8IZP0 508 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 TMEM130Q8N3G9 435 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 NECAB1Q8N987 351 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 BICD2Q8TD16 824 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 CCDC12Q8WUD4 166 aaPredicted RBP9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 TMEM169Q96HH4 297 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 SCLT1Q96NL6 688 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 GAD1Q99259 594 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 LXNQ9BS40 222 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 TMEM60Q9H2L4 133 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 GPRC5CQ9NQ84 441 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 PRG3Q9Y2Y8 225 aaPredicted RBP9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 IPPQ9Y573 584 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 CHD8Q9HCK8 2581 aa9.27□□□□□ -0.93
SCARNA20.3-201ENST00000516913 CACNA1IQ9P0X4 2223 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 ARL5CA6NH57 179 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 PROB1E7EW31 1015 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 C2CD2LO14523 706 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 GFRA3O60609 400 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 JAK2O60674 1132 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 PFKFB2O60825 505 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 SPATA31C1P0DKV0 1188 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 NCLP19338 710 aaKnown RBP9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 GLRA2P23416 452 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 SCNN1GP51170 649 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 POLGP54098 1239 aaPredicted RBP9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 PTENP60484 403 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 MBTD1Q05BQ5 628 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 CAPSQ13938 189 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 EMC2Q15006 297 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 NONOQ15233 471 aaKnown RBP eCLIP9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 EPHA7Q15375 998 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 NAB2Q15742 525 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 MCTP2Q6DN12 878 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 PPP4R3AQ6IN85 833 aa9.26□□□□□ -0.93
SCARNA20.3-201ENST00000516913 GLB1LQ6UWU2 654 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms