RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 CSRNP2Q9H175 543 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 AAASQ9NRG9 546 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 USP20Q9Y2K6 914 aa17.42■□□□□ 0.38
SERF1B-208ENST00000515588 ATG2AQ2TAZ0 1938 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 HIP1RO75146 1068 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 FGF18O76093 207 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 EDN1P05305 212 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 NCLP19338 710 aaKnown RBP17.41■□□□□ 0.38
SERF1B-208ENST00000515588 MARCKSP29966 332 aaPredicted RBP17.41■□□□□ 0.38
SERF1B-208ENST00000515588 IRS1P35568 1242 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 LONP1P36776 959 aaKnown RBP17.41■□□□□ 0.38
SERF1B-208ENST00000515588 SLC12A3P55017 1021 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 CEBPZQ03701 1054 aaKnown RBP17.41■□□□□ 0.38
SERF1B-208ENST00000515588 FAM187BQ17R55 369 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 NOMO2Q5JPE7 1267 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 KCNT2Q6UVM3 1135 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 GLB1LQ6UWU2 654 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 PPP4R3CPQ6ZMV5 832 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 SYT2Q8N9I0 419 aaPredicted RBP17.41■□□□□ 0.38
SERF1B-208ENST00000515588 POF1BQ8WVV4 589 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 HLA-CQ95604 372 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 PGBD4Q96DM1 585 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 USP28Q96RU2 1077 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 NT5C3AQ9H0P0 336 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 C2orf40Q9H1Z8 148 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 NSUN3Q9H649 340 aaKnown RBP17.41■□□□□ 0.38
SERF1B-208ENST00000515588 FBXO2Q9UK22 296 aaPredicted RBP17.41■□□□□ 0.38
SERF1B-208ENST00000515588 INPP5FQ9Y2H2 1132 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 HES2Q9Y543 173 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 IPPQ9Y573 584 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 PCDHGC5Q9Y5F6 944 aa17.41■□□□□ 0.38
SERF1B-208ENST00000515588 A0A1B0GUA9 196 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 B4GALT3O60512 393 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 PLA2G4BP0C869 781 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 UBA7P41226 1012 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 MRPS5P82675 430 aaKnown RBP17.4■□□□□ 0.38
SERF1B-208ENST00000515588 NCBP1Q09161 790 aaKnown RBP17.4■□□□□ 0.38
SERF1B-208ENST00000515588 PPP2R5AQ15172 486 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 SPECC1Q5M775 1068 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 USP49Q70CQ1 688 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 ZBTB8OSQ8IWT0 167 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 THNSL1Q8IYQ7 743 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 KCTD17Q8N5Z5 321 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 DEPTORQ8TB45 409 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 CDK5RAP3Q96JB5 506 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 ZNF558Q96NG5 402 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 ASB2Q96Q27 587 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 MRPL9Q9BYD2 267 aaKnown RBP17.4■□□□□ 0.38
SERF1B-208ENST00000515588 ZSCAN16Q9H4T2 348 aaPredicted RBP17.4■□□□□ 0.38
SERF1B-208ENST00000515588 TBC1D13Q9NVG8 400 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 PRMT7Q9NVM4 692 aaPredicted RBP17.4■□□□□ 0.38
SERF1B-208ENST00000515588 COG5Q9UP83 839 aa17.4■□□□□ 0.38
SERF1B-208ENST00000515588 PLXNA4Q9HCM2 1894 aa17.39■□□□□ 0.38
SERF1B-208ENST00000515588 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.39■□□□□ 0.37
SERF1B-208ENST00000515588 SFI1A8K8P3 1242 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 SLC26A4O43511 780 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 SSBP05455 408 aaKnown RBP eCLIP17.39■□□□□ 0.37
SERF1B-208ENST00000515588 PRKCBP05771 671 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 GUCY2CP25092 1073 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 NPTX2P47972 431 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 COL19A1Q14993 1142 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 KARSQ15046 597 aaKnown RBP17.39■□□□□ 0.37
SERF1B-208ENST00000515588 CSPP1Q1MSJ5 1256 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 TJAP1Q5JTD0 557 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 SPRYD3Q8NCJ5 442 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 EPSTI1Q96J88 318 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 IFT74Q96LB3 600 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 PRIMPOLQ96LW4 560 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 COL25A1Q9BXS0 654 aaPredicted RBP17.39■□□□□ 0.37
SERF1B-208ENST00000515588 NXF3Q9H4D5 531 aaKnown RBP17.39■□□□□ 0.37
SERF1B-208ENST00000515588 NRDE2Q9H7Z3 1164 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 RSAD1Q9HA92 442 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 BLOC1S4Q9NUP1 217 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
SERF1B-208ENST00000515588 MUC3AQ02505 3323 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 CNTNAP2Q9UHC6 1331 aa17.39■□□□□ 0.37
SERF1B-208ENST00000515588 NPHP3-ACAD11A0A0J9YXS1 232 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 NT5C1B-RDH14C9J2C7 533 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 ACKR2O00590 384 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 NPTXRO95502 500 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 ITGA4P13612 1032 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 LIG1P18858 919 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 PLCG1P19174 1290 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 GTF2F1P35269 517 aaKnown RBP eCLIP17.38■□□□□ 0.37
SERF1B-208ENST00000515588 KCNQ1P51787 676 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 PEX3P56589 373 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 BCAR1P56945 870 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 ERVFC1P60507 584 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 PLCB3Q01970 1234 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 UBE3AQ05086 875 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 RAD51AP2Q09MP3 1159 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 HYAL1Q12794 435 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 MAPK6Q16659 721 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 ARSHQ5FYA8 562 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 FOXD4L5Q5VV16 416 aaPredicted RBP17.38■□□□□ 0.37
SERF1B-208ENST00000515588 SLC27A1Q6PCB7 646 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 ADGRD2Q7Z7M1 963 aa17.38■□□□□ 0.37
SERF1B-208ENST00000515588 TMEM173Q86WV6 379 aaPredicted RBP17.38■□□□□ 0.37
SERF1B-208ENST00000515588 ZNF280BQ86YH2 543 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms