RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 CEP170P1Q96L14 293 aa20.58■□□□□ 0.89
SPOP-220ENST00000515508 GBP3Q9H0R5 595 aa20.58■□□□□ 0.89
SPOP-220ENST00000515508 IRF2BPLQ9H1B7 796 aa20.58■□□□□ 0.89
SPOP-220ENST00000515508 MINDY3Q9H8M7 445 aa20.58■□□□□ 0.89
SPOP-220ENST00000515508 PLXNA3P51805 1871 aa20.58■□□□□ 0.88
SPOP-220ENST00000515508 STK36Q9NRP7 1315 aa20.57■□□□□ 0.88
SPOP-220ENST00000515508 CCDC194A0A1B0GVG4 234 aa20.57■□□□□ 0.88
SPOP-220ENST00000515508 TBX3O15119 743 aa20.57■□□□□ 0.88
SPOP-220ENST00000515508 GAS2O43903 313 aaKnown RBP20.57■□□□□ 0.88
SPOP-220ENST00000515508 HOXA11P31270 313 aaPredicted RBP20.57■□□□□ 0.88
SPOP-220ENST00000515508 KANK3Q6NY19 840 aa20.57■□□□□ 0.88
SPOP-220ENST00000515508 C4orf19Q8IY42 314 aa20.57■□□□□ 0.88
SPOP-220ENST00000515508 PRPF31Q8WWY3 499 aaKnown RBP20.57■□□□□ 0.88
SPOP-220ENST00000515508 HAS1Q92839 578 aa20.57■□□□□ 0.88
SPOP-220ENST00000515508 LXNQ9BS40 222 aa20.57■□□□□ 0.88
SPOP-220ENST00000515508 TMEM175Q9BSA9 504 aa20.57■□□□□ 0.88
SPOP-220ENST00000515508 SFXN1Q9H9B4 322 aa20.57■□□□□ 0.88
SPOP-220ENST00000515508 RSAD1Q9HA92 442 aa20.57■□□□□ 0.88
SPOP-220ENST00000515508 DBR1Q9UK59 544 aaKnown RBP20.57■□□□□ 0.88
SPOP-220ENST00000515508 ZFHX2Q9C0A1 2572 aaPredicted RBP20.56■□□□□ 0.88
SPOP-220ENST00000515508 DDHD2O94830 711 aa20.56■□□□□ 0.88
SPOP-220ENST00000515508 ASGR2P07307 311 aa20.56■□□□□ 0.88
SPOP-220ENST00000515508 LAMTOR4Q0VGL1 99 aa20.56■□□□□ 0.88
SPOP-220ENST00000515508 UBXN11Q5T124 520 aa20.56■□□□□ 0.88
SPOP-220ENST00000515508 CABP7Q86V35 215 aa20.56■□□□□ 0.88
SPOP-220ENST00000515508 PLCD3Q8N3E9 789 aa20.56■□□□□ 0.88
SPOP-220ENST00000515508 TMEM143Q96AN5 459 aa20.56■□□□□ 0.88
SPOP-220ENST00000515508 SLKQ9H2G2 1235 aaPredicted RBP20.56■□□□□ 0.88
SPOP-220ENST00000515508 SMOC2Q9H3U7 446 aa20.56■□□□□ 0.88
SPOP-220ENST00000515508 FAM86C1Q9NVL1 165 aa20.56■□□□□ 0.88
SPOP-220ENST00000515508 KANSL3Q9P2N6 904 aa20.56■□□□□ 0.88
SPOP-220ENST00000515508 ST18O60284 1047 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 LILRB3O75022 631 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 CDKL5O76039 1030 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 YWHABP31946 246 aaKnown RBP20.55■□□□□ 0.88
SPOP-220ENST00000515508 CLCN4P51793 760 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 AFF1P51825 1210 aaKnown RBP20.55■□□□□ 0.88
SPOP-220ENST00000515508 SPIRE1Q08AE8 756 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 SCRN1Q12765 414 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 EMC2Q15006 297 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 EPHA7Q15375 998 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 TMC5Q6UXY8 1006 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 GPR149Q86SP6 731 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 FEZF2Q8TBJ5 459 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 TCP11Q8WWU5 503 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 KLHL5Q96PQ7 755 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 NAP1L4Q99733 375 aaKnown RBP20.55■□□□□ 0.88
SPOP-220ENST00000515508 EMILIN2Q9BXX0 1053 aa20.55■□□□□ 0.88
SPOP-220ENST00000515508 INPPL1O15357 1258 aa20.54■□□□□ 0.88
SPOP-220ENST00000515508 GALR2O43603 387 aaPredicted RBP20.54■□□□□ 0.88
SPOP-220ENST00000515508 CCNT1O60563 726 aaKnown RBP20.54■□□□□ 0.88
SPOP-220ENST00000515508 CNPP09543 421 aaKnown RBP20.54■□□□□ 0.88
SPOP-220ENST00000515508 SRGAP2CP0DJJ0 459 aa20.54■□□□□ 0.88
SPOP-220ENST00000515508 NCLP19338 710 aaKnown RBP20.54■□□□□ 0.88
SPOP-220ENST00000515508 PCBP1Q15365 356 aaKnown RBP eCLIP20.54■□□□□ 0.88
SPOP-220ENST00000515508 FERMT3Q86UX7 667 aa20.54■□□□□ 0.88
SPOP-220ENST00000515508 PDRG1Q9NUG6 133 aa20.54■□□□□ 0.88
SPOP-220ENST00000515508 LIMD1Q9UGP4 676 aa20.54■□□□□ 0.88
SPOP-220ENST00000515508 TDRD15B5MCY1 1934 aaKnown RBP20.54■□□□□ 0.88
SPOP-220ENST00000515508 VPS13AQ96RL7 3174 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 ASAP2O43150 1006 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 XBP1P17861 261 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 C15orf39Q6ZRI6 1047 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 PIK3AP1Q6ZUJ8 805 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 CCDC149Q6ZUS6 474 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 OTUD6AQ7L8S5 288 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 POTEDQ86YR6 584 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 TMEM105Q8N8V8 129 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 RNF149Q8NC42 400 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 SMG8Q8ND04 991 aaKnown RBP20.53■□□□□ 0.88
SPOP-220ENST00000515508 CNNM3Q8NE01 707 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 OXER1Q8TDS5 423 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 ATOH1Q92858 354 aaPredicted RBP20.53■□□□□ 0.88
SPOP-220ENST00000515508 ZSWIM4Q9H7M6 989 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 BMP2KQ9NSY1 1161 aaPredicted RBP20.53■□□□□ 0.88
SPOP-220ENST00000515508 GJB4Q9NTQ9 266 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 MARCH5Q9NX47 278 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 RGL1Q9NZL6 768 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 FAN1Q9Y2M0 1017 aa20.53■□□□□ 0.88
SPOP-220ENST00000515508 H0Y858 1186 aa20.52■□□□□ 0.88
SPOP-220ENST00000515508 NRP1O14786 923 aa20.52■□□□□ 0.88
SPOP-220ENST00000515508 GFRA3O60609 400 aa20.52■□□□□ 0.88
SPOP-220ENST00000515508 EFEMP2O95967 443 aa20.52■□□□□ 0.88
SPOP-220ENST00000515508 POMCP01189 267 aa20.52■□□□□ 0.88
SPOP-220ENST00000515508 SOD2P04179 222 aa20.52■□□□□ 0.88
SPOP-220ENST00000515508 ALDH2P05091 517 aa20.52■□□□□ 0.88
SPOP-220ENST00000515508 RNF168Q8IYW5 571 aaPredicted RBP20.52■□□□□ 0.88
SPOP-220ENST00000515508 DYDC2Q96IM9 177 aa20.52■□□□□ 0.88
SPOP-220ENST00000515508 FAM193BQ96PV7 902 aaPredicted RBP20.52■□□□□ 0.88
SPOP-220ENST00000515508 MTRQ99707 1265 aa20.52■□□□□ 0.88
SPOP-220ENST00000515508 UBN1Q9NPG3 1134 aa20.52■□□□□ 0.88
SPOP-220ENST00000515508 XPNPEP1Q9NQW7 623 aa20.52■□□□□ 0.88
SPOP-220ENST00000515508 MRPL17Q9NRX2 175 aaKnown RBP20.52■□□□□ 0.88
SPOP-220ENST00000515508 IPPQ9Y573 584 aa20.52■□□□□ 0.88
SPOP-220ENST00000515508 PROB1E7EW31 1015 aa20.51■□□□□ 0.87
SPOP-220ENST00000515508 TSPAN1O60635 241 aa20.51■□□□□ 0.87
SPOP-220ENST00000515508 PFKFB2O60825 505 aa20.51■□□□□ 0.87
SPOP-220ENST00000515508 ERLIN2O94905 339 aa20.51■□□□□ 0.87
SPOP-220ENST00000515508 SSBP05455 408 aaKnown RBP eCLIP20.51■□□□□ 0.87
SPOP-220ENST00000515508 KLRC2P26717 231 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms