RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 NME9Q86XW9 330 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 PASD1Q8IV76 773 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 ADGRG2Q8IZP9 1017 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 DDX1Q92499 740 aaKnown RBP5.62□□□□□ -1.51
CLDND1-228ENST00000513873 E2F7Q96AV8 911 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 SYT3Q9BQG1 590 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.62□□□□□ -1.51
CLDND1-228ENST00000513873 LUC7LQ9NQ29 371 aaKnown RBP5.62□□□□□ -1.51
CLDND1-228ENST00000513873 ACSS2Q9NR19 701 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 SPATA6Q9NWH7 488 aaPredicted RBP5.62□□□□□ -1.51
CLDND1-228ENST00000513873 POLKQ9UBT6 870 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 RCAN3Q9UKA8 241 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 USP6P35125 1406 aa5.62□□□□□ -1.51
CLDND1-228ENST00000513873 PARP4Q9UKK3 1724 aaKnown RBP5.62□□□□□ -1.51
CLDND1-228ENST00000513873 A0A1B0GTL3 188 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 OVOL3O00110 214 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 CBX4O00257 560 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 ADCY9O60503 1353 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 TRIM13O60858 407 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 C4BPAP04003 597 aaKnown RBP5.61□□□□□ -1.51
CLDND1-228ENST00000513873 CHGBP05060 677 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 MYCLP1P12525 358 aaPredicted RBP5.61□□□□□ -1.51
CLDND1-228ENST00000513873 PTGS1P23219 599 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 KIF18BQ86Y91 864 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 TCP11L2Q8N4U5 519 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 DTX3Q8N9I9 347 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 CALML6Q8TD86 181 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 GBP4Q96PP9 640 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 SPATA25Q9BR10 227 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 CHMP4AQ9BY43 222 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 TMEM168Q9H0V1 697 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 PEAK1Q9H792 1746 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 SLC39A2Q9NP94 309 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 CD163L1Q9NR16 1453 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 RBPJLQ9UBG7 517 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 B4GALT6Q9UBX8 382 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 ZFP69BQ9UJL9 534 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 B3GALT1Q9Y5Z6 326 aa5.61□□□□□ -1.51
CLDND1-228ENST00000513873 CRYBG1Q9Y4K1 1723 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 ALS2Q96Q42 1657 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 IL16Q14005 1332 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.6□□□□□ -1.51
CLDND1-228ENST00000513873 TOMM70O94826 608 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 KIF11P52732 1056 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 OCRLQ01968 901 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 SMAD2Q15796 467 aaKnown RBP5.6□□□□□ -1.51
CLDND1-228ENST00000513873 FAM26FQ5R3K3 315 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 MCTP2Q6DN12 878 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 CC2D1AQ6P1N0 951 aaPredicted RBP5.6□□□□□ -1.51
CLDND1-228ENST00000513873 BORAQ6PGQ7 559 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 OTOP1Q7RTM1 612 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 PROSER1Q86XN7 944 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 NOSTRINQ8IVI9 506 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 CCDC146Q8IYE0 955 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 OR2W6PQ8NHA6 318 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 ERCC4Q92889 916 aaPredicted RBP5.6□□□□□ -1.51
CLDND1-228ENST00000513873 LCORQ96JN0 433 aaPredicted RBP5.6□□□□□ -1.51
CLDND1-228ENST00000513873 GPR20Q99678 358 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 BARX1Q9HBU1 254 aaPredicted RBP5.6□□□□□ -1.51
CLDND1-228ENST00000513873 INCENPQ9NQS7 918 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 MYRFQ9Y2G1 1151 aa5.6□□□□□ -1.51
CLDND1-228ENST00000513873 THRAP3Q9Y2W1 955 aaKnown RBP5.6□□□□□ -1.51
CLDND1-228ENST00000513873 OVOS2A0A0G2JMS6 1433 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 OVOS2A0A0J9YW53 1432 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 OVOS2Q6IE36 1432 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 H0Y858 1186 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 TRAF5O00463 557 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 CYP17A1P05093 508 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 MMEP08473 750 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 POU3F2P20265 443 aaPredicted RBP5.59□□□□□ -1.51
CLDND1-228ENST00000513873 CANXP27824 592 aaKnown RBP5.59□□□□□ -1.51
CLDND1-228ENST00000513873 AOAHP28039 575 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 TMPOP42166 694 aaKnown RBP5.59□□□□□ -1.51
CLDND1-228ENST00000513873 MECP2P51608 486 aaKnown RBP5.59□□□□□ -1.51
CLDND1-228ENST00000513873 RIPK4P57078 832 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 SLFN5Q08AF3 891 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 WDR72Q3MJ13 1102 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 TM4SF20Q53R12 229 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 CT47A1Q5JQC4 288 aaPredicted RBP5.59□□□□□ -1.51
CLDND1-228ENST00000513873 NT5DC1Q5TFE4 455 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 C11orf74Q86VG3 221 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 STPG3Q8N7X2 389 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 ADAMTS17Q8TE56 1095 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 LEO1Q8WVC0 666 aaPredicted RBP5.59□□□□□ -1.51
CLDND1-228ENST00000513873 RTF1Q92541 710 aaKnown RBP5.59□□□□□ -1.51
CLDND1-228ENST00000513873 DLG3Q92796 817 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 SCYL1Q96KG9 808 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 TACO1Q9BSH4 297 aaKnown RBP5.59□□□□□ -1.51
CLDND1-228ENST00000513873 TARS2Q9BW92 718 aaKnown RBP5.59□□□□□ -1.51
CLDND1-228ENST00000513873 XYLT2Q9H1B5 865 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 TMX1Q9H3N1 280 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 CHMP4BQ9H444 224 aaKnown RBP5.59□□□□□ -1.51
CLDND1-228ENST00000513873 PRDM11Q9NQV5 511 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 UCKL1Q9NWZ5 548 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 GALNT8Q9NY28 637 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 ASB1Q9Y576 335 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 QSER1Q2KHR3 1735 aa5.59□□□□□ -1.51
CLDND1-228ENST00000513873 TRPM3Q9HCF6 1732 aaPredicted RBP5.59□□□□□ -1.51
CLDND1-228ENST00000513873 RTL1A6NKG5 1358 aa5.58□□□□□ -1.52
CLDND1-228ENST00000513873 FLT4P35916 1363 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms