RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 TSHZ2Q9NRE2 1034 aa14.96□□□□□ -0.01
POLR2J3-217ENST00000513438 ORC3Q9UBD5 711 aaPredicted RBP14.96□□□□□ -0.01
POLR2J3-217ENST00000513438 NR2E1Q9Y466 385 aa14.96□□□□□ -0.01
POLR2J3-217ENST00000513438 PPME1Q9Y570 386 aa14.96□□□□□ -0.01
POLR2J3-217ENST00000513438 FAM205CA6NFA0 338 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 C2CD4DB7Z1M9 353 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 ASAP2O43150 1006 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 B4GALT3O60512 393 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 BAG4O95429 457 aaKnown RBP14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 ALDH2P05091 517 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 EPCAMP16422 314 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 MTHFRP42898 656 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 AFF1P51825 1210 aaKnown RBP14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 GIT2Q14161 759 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 CTTNQ14247 550 aaKnown RBP14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 UBXN11Q5T124 520 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 URGCPQ8TCY9 931 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 SLC22A17Q8WUG5 538 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 TCP11Q8WWU5 503 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 RIPOR3Q96MK2 946 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 NECTIN4Q96NY8 510 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 VN1R3Q9BXE9 311 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 ZSWIM4Q9H7M6 989 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 RSAD1Q9HA92 442 aa14.95□□□□□ -0.02
POLR2J3-217ENST00000513438 ZDBF2Q9HCK1 2354 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 ST18O60284 1047 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 SLITRK3O94933 977 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 FDPSP14324 419 aaKnown RBP14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 CYP4A11Q02928 519 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 SPIRE1Q08AE8 756 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 NR5A1Q13285 461 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 ATAT1Q5SQI0 421 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 FERMT3Q86UX7 667 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 TPH2Q8IWU9 490 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 SLFN12Q8IYM2 578 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 RNF149Q8NC42 400 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 KREMEN2Q8NCW0 462 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 ATOH1Q92858 354 aaPredicted RBP14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 FAM193BQ96PV7 902 aaPredicted RBP14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 FAM86C1Q9NVL1 165 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 KANSL3Q9P2N6 904 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 FAN1Q9Y2M0 1017 aa14.94□□□□□ -0.02
POLR2J3-217ENST00000513438 NRP1O14786 923 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 GAS2O43903 313 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 POMCP01189 267 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 AVPR2P30518 371 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 KRT2P35908 639 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 AK2P54819 239 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 TCF15Q12870 199 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 EMC2Q15006 297 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 NECAB1Q8N987 351 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 SMG8Q8ND04 991 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 WASF1Q92558 559 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 KLHL5Q96PQ7 755 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 MTRQ99707 1265 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 IRF2BPLQ9H1B7 796 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 DZANK1Q9NVP4 752 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 PCDHA12Q9UN75 941 aa14.93□□□□□ -0.02
POLR2J3-217ENST00000513438 CNTNAP2Q9UHC6 1331 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 USP34Q70CQ2 3546 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 GFRA3O60609 400 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 PDGFBP01127 241 aaPredicted RBP14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 SSBP05455 408 aaKnown RBP eCLIP14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 ITGA4P13612 1032 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 NCLP19338 710 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 KLRC2P26717 231 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 VCPP55072 806 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 ANKRD1Q15327 319 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 PTPN14Q15678 1187 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 KIAA1841Q6NSI8 718 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 TMC5Q6UXY8 1006 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 CABP7Q86V35 215 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 PPFIBP1Q86W92 1011 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 CNNM3Q8NE01 707 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 FEZF2Q8TBJ5 459 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 TNFRSF25Q93038 417 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 EIF2AK1Q9BQI3 630 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 TMEM175Q9BSA9 504 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 RNF39Q9H2S5 420 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 XPNPEP1Q9NQW7 623 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 LIMD1Q9UGP4 676 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 DBR1Q9UK59 544 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 SORCS3Q9UPU3 1222 aa14.92□□□□□ -0.02
POLR2J3-217ENST00000513438 KMT2EQ8IZD2 1858 aa14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 LILRB3O75022 631 aa14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 ERLIN2O94905 339 aa14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 BRD1O95696 1058 aa14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 CNPP09543 421 aaKnown RBP14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 ANAPC15P60006 121 aa14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 PTENP60484 403 aa14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 MXD4Q14582 209 aaPredicted RBP14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 ME3Q16798 604 aa14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 CPB2Q96IY4 423 aa14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 SNX27Q96L92 541 aa14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 HSD17B14Q9BPX1 270 aa14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 EMILIN2Q9BXX0 1053 aa14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 EIF2AQ9BY44 585 aaKnown RBP14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 BRMS1Q9HCU9 246 aa14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 UBN1Q9NPG3 1134 aa14.91□□□□□ -0.02
POLR2J3-217ENST00000513438 MIOSQ9NXC5 875 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms