RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 NAALADL2Q58DX5 795 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 C16orf86Q6ZW13 317 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 SNX19Q92543 992 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 OPTNQ96CV9 577 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 KIF2CQ99661 725 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 MRPL9Q9BYD2 267 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 PPP1R12CQ9BZL4 782 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 DDX56Q9NY93 547 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 FBXL21Q9UKT6 434 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 GPR75-ASB3A0A0A6YYF3 556 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 LRRN2O75325 713 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 ODC1P11926 461 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 YWHABP31946 246 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 IFNAR2P48551 515 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 RAB27AP51159 221 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 PPP4CP60510 307 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 PTPROQ16827 1216 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 SFR1Q86XK3 245 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 ZNF579Q8NAF0 562 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 RNF208Q9H0X6 261 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 DSEQ9UL01 958 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 DDNO94850 711 aaPredicted RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 NOP14P78316 857 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 IRAK1BP1Q5VVH5 260 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 TTC19Q6DKK2 380 aaPredicted RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 ZNF589Q86UQ0 364 aaPredicted RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 ULK4Q96C45 1275 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 DDX27Q96GQ7 796 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 LRGUKQ96M69 825 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 MAP3K14Q99558 947 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 TEX12Q9BXU0 123 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 IP6K2Q9UHH9 426 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 RNF17Q9BXT8 1623 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 CFAP99D6REC4 459 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 GSPT1P15170 499 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 EPHB3P54753 998 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 PRMT2P55345 433 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 RWDD2BP57060 319 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 KNOP1Q1ED39 458 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 NBPF15Q8N660 670 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 MORC4Q8TE76 937 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 CCDC124Q96CT7 223 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 SEPT5Q99719 369 aaPredicted RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 SPATA16Q9BXB7 569 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 MOV10L1Q9BXT6 1211 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 CPA4Q9UI42 421 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 UBQLN1Q9UMX0 589 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 AGAP1Q9UPQ3 857 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 PCDHA5Q9Y5H7 936 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 XYLBO75191 536 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 NR3C1P04150 777 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 ADORA2BP29275 332 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 BACE1P56817 501 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 FKBP1AP62942 108 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 BASP1P80723 227 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 ZBED6P86452 979 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 PDIA5Q14554 519 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 KCNB1Q14721 858 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 EFCAB12Q6NXP0 572 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 NT5DC4Q86YG4 428 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 ABCA9Q8IUA7 1624 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 GPATCH11Q8N954 259 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 SLC44A5Q8NCS7 719 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 HSPH1Q92598 858 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 ZDHHC15Q96MV8 337 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 MXRA8Q9BRK3 442 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 GSG1L2A8MUP6 293 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 E5RI56 91 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 PDHXO00330 501 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 PPP1R12AO14974 1030 aaPredicted RBP4.53□□□□□ -1.69
VCAN-209ENST00000513016 PPFIA2O75334 1257 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 CAPN15O75808 1086 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 MOCS2O96007 188 aaPredicted RBP4.53□□□□□ -1.69
VCAN-209ENST00000513016 SLC2A3P11169 496 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 CREMQ03060 361 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 PPATQ06203 517 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 CXCL9Q07325 125 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 CDO1Q16878 200 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 RABL6Q3YEC7 729 aaPredicted RBP4.53□□□□□ -1.69
VCAN-209ENST00000513016 CES5AQ6NT32 575 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 ENAHQ8N8S7 591 aaPredicted RBP4.53□□□□□ -1.69
VCAN-209ENST00000513016 ATP6V0D2Q8N8Y2 350 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 ENOX1Q8TC92 643 aaKnown RBP4.53□□□□□ -1.69
VCAN-209ENST00000513016 AFAP1L1Q8TED9 768 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 GIPC2Q8TF65 315 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 SCFD1Q8WVM8 642 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 XPO4Q9C0E2 1151 aaKnown RBP4.53□□□□□ -1.69
VCAN-209ENST00000513016 SMYD2Q9NRG4 433 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 DNAJC12Q9UKB3 198 aa4.53□□□□□ -1.69
VCAN-209ENST00000513016 TECPR2O15040 1411 aa4.52□□□□□ -1.69
VCAN-209ENST00000513016 ZMYM2Q9UBW7 1377 aa4.52□□□□□ -1.69
VCAN-209ENST00000513016 MIF4GDA9UHW6 222 aaKnown RBP4.52□□□□□ -1.69
VCAN-209ENST00000513016 CA12O43570 354 aa4.52□□□□□ -1.69
VCAN-209ENST00000513016 SLC11A2P49281 568 aa4.52□□□□□ -1.69
VCAN-209ENST00000513016 NDUFA8P51970 172 aa4.52□□□□□ -1.69
VCAN-209ENST00000513016 ADCY1Q08828 1119 aa4.52□□□□□ -1.69
VCAN-209ENST00000513016 SPOPLQ6IQ16 392 aa4.52□□□□□ -1.69
VCAN-209ENST00000513016 RGMBQ6NW40 437 aa4.52□□□□□ -1.69
VCAN-209ENST00000513016 PDIK1LQ8N165 341 aa4.52□□□□□ -1.69
VCAN-209ENST00000513016 TEKT4Q8WW24 435 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms