RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 FAM86B1E9PN63 330 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 ABL1P00519 1130 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 FAM86B2P0C5J1 330 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 PNMA6AP0CW24 399 aaPredicted RBP14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 ANXA13P27216 316 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 GNA15P30679 374 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 METTL23Q86XA0 190 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 MICALL1Q8N3F8 863 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 NME8Q8N427 588 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 GPRC5AQ8NFJ5 357 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 WHAMMQ8TF30 809 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 AGPAT1Q99943 283 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 NUDT12Q9BQG2 462 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 GCOM2Q9BZD3 368 aaPredicted RBP14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 SYNGAP1Q96PV0 1343 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 CCL15-CCL14A0A0B4J2E2 113 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 GNGT1P63211 74 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 MXRA7P84157 204 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 TAF1CQ15572 869 aaPredicted RBP14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 CCL15Q16663 113 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 GABPB2Q8TAK5 448 aaPredicted RBP14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 ZNF564Q8TBZ8 553 aaPredicted RBP14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 CALR3Q96L12 384 aaKnown RBP14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 PNMA5Q96PV4 448 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 PACSIN2Q9UNF0 486 aaPredicted RBP14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 PPP2R3BQ9Y5P8 575 aa14.05□□□□□ -0.16
PCDHA4-202ENST00000512229 PPFIA4O75335 1185 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 ARL1P40616 181 aaPredicted RBP14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 RFC5P40937 340 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 SNRPFP62306 86 aaKnown RBP14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 DYNLT1P63172 113 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 FMO2Q99518 471 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 NGRNQ9NPE2 291 aaKnown RBP14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 NFU1Q9UMS0 254 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 IGSF9BQ9UPX0 1349 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 TNPO2O14787 897 aaKnown RBP14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 PRPSAP2O60256 369 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 PSMC6P62333 389 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 RSRC2Q7L4I2 434 aaKnown RBP14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 ANKRD42Q8N9B4 389 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 GTF3C2Q8WUA4 911 aaPredicted RBP14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 PKNOX2Q96KN3 472 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 RNASELQ05823 741 aaKnown RBP14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 PCNX4Q63HM2 1172 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 SLC30A10Q6XR72 485 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 KCTD6Q8NC69 237 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 SCFD1Q8WVM8 642 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 EPC1Q9H2F5 836 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 SNX12Q9UMY4 172 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 PARP4Q9UKK3 1724 aaKnown RBP14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 COL14A1Q05707 1796 aaKnown RBP14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 DYNC1LI2O43237 492 aaPredicted RBP14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 CALB1P05937 261 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 CETPP11597 493 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 KLHDC7AQ5VTJ3 777 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 TRIM72Q6ZMU5 477 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 SH3RF1Q7Z6J0 888 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 NUP85Q9BW27 656 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 CAPS2Q9BXY5 557 aa14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 MKRN1Q9UHC7 482 aaKnown RBP14.04□□□□□ -0.16
PCDHA4-202ENST00000512229 ARHGEF37A1IGU5 675 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 MCF2LO15068 1137 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 MAGEB2O15479 319 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 TADA3O75528 432 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 GH1P01241 217 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 PSMA2P25787 234 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 STX2P32856 288 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 GALCP54803 685 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 CUL1Q13616 776 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 E2F4Q16254 413 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 BEST2Q8NFU1 509 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 MGARPQ8TDB4 240 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 HVCN1Q96D96 273 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 PARK7Q99497 189 aaKnown RBP14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 TARS2Q9BW92 718 aaKnown RBP14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 ZMYND15Q9H091 742 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 GPRC5CQ9NQ84 441 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 TRIM10Q9UDY6 481 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 ANAPC5Q9UJX4 755 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 PODXLO00592 558 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 DSTYKQ6XUX3 929 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 NYAP1Q6ZVC0 841 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 SPATA4Q8NEY3 305 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 MTMR9Q96QG7 549 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 SLC38A10Q9HBR0 1119 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 BLOC1S4Q9NUP1 217 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 WDR72Q3MJ13 1102 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 FIGNQ5HY92 759 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 IER5Q5VY09 327 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 CC2D1AQ6P1N0 951 aaPredicted RBP14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 KIAA0895Q8NCT3 520 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 OR6J1Q8NGC5 347 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 BCAS4Q8TDM0 211 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 PXMP2Q9NR77 195 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 STRIP2Q9ULQ0 834 aa14.03□□□□□ -0.16
PCDHA4-202ENST00000512229 GABPAQ06546 454 aa14.02□□□□□ -0.16
PCDHA4-202ENST00000512229 ZNF211Q13398 564 aaPredicted RBP14.02□□□□□ -0.16
PCDHA4-202ENST00000512229 ZSCAN26Q16670 478 aa14.02□□□□□ -0.16
PCDHA4-202ENST00000512229 OTOP1Q7RTM1 612 aa14.02□□□□□ -0.16
PCDHA4-202ENST00000512229 SMC6Q96SB8 1091 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms