RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 BECN1Q14457 450 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 AOC3Q16853 763 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 TYW1BQ6NUM6 668 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 PKN3Q6P5Z2 889 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 MTHFD1LQ6UB35 978 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 GALNT7Q86SF2 657 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 FCHSD1Q86WN1 690 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 SPATA2LQ8IUW3 424 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 GBP7Q8N8V2 638 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 PTCD2Q8WV60 388 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 C7orf43Q8WVR3 580 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 TNPO1Q92973 898 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 FATE1Q969F0 183 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 COL26A1Q96A83 441 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 FERMT2Q96AC1 680 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 DHTKD1Q96HY7 919 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 ZNF845Q96IR2 970 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 SPATA17Q96L03 361 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 TBCBQ99426 244 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 LSM14BQ9BX40 385 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 VCPKMTQ9H867 229 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 XAB2Q9HCS7 855 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 HPS4Q9NQG7 708 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 PRDM5Q9NQX1 630 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 SUCOQ9UBS9 1254 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 AASSQ9UDR5 926 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 MTUS1Q9ULD2 1270 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 SSX2IPQ9Y2D8 614 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 LRCH1Q9Y2L9 728 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 LAMB2P55268 1798 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 RCCD1A6NED2 376 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 THAP12O43422 761 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 SOCS5O75159 536 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 ZNF254O75437 659 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 DDHD2O94830 711 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 SLC34A2O95436 690 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 PCNAP12004 261 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 ATP4AP20648 1035 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 KLRK1P26718 216 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 L1CAMP32004 1257 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 GBP2P32456 591 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 USP8P40818 1118 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 CCNFP41002 786 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 DCAF7P61962 342 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 CTAG1AP78358 180 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 CENPCQ03188 943 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 COL9A2Q14055 689 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 NAA25Q14CX7 972 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 TAF12Q16514 161 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 DOK7Q18PE1 504 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 SLC10A6Q3KNW5 377 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 SFMBT2Q5VUG0 894 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 FBXL19Q6PCT2 694 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 ANGPTL8Q6UXH0 198 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 RALYLQ86SE5 291 aaKnown RBP5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 NOSTRINQ8IVI9 506 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 CEP97Q8IW35 865 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 TRIM42Q8IWZ5 723 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 PDCL2Q8N4E4 241 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 LRRC71Q8N4P6 559 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 SPERTQ8NA61 448 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 TBC1D22AQ8WUA7 517 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 SGCDQ92629 289 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 NAF1Q96HR8 494 aaKnown RBP5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 TMEM237Q96Q45 408 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 KIAA1683Q9H0B3 1180 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 VPS11Q9H270 941 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 LIN28AQ9H9Z2 209 aaKnown RBP5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 DNM3Q9UQ16 869 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 ANKRD6Q9Y2G4 727 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 SLC4A4Q9Y6R1 1079 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 UTYO14607 1347 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 DNAJC25-GNG10A0A024R161 153 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 PPIP5K2O43314 1243 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 RIPK2O43353 540 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 CEP104O60308 925 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 TSC22D2O75157 780 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 RTN2O75298 545 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 ABCB4P21439 1286 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 ATP5F1P24539 256 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 YY1P25490 414 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 CYP2C19P33261 490 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 HSD17B2P37059 387 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 ASMTP46597 345 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 DEUP1Q05D60 604 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 ZNF252P-AS1Q0IIN9 211 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 KCNB1Q14721 858 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 LLGL1Q15334 1064 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 CCDC38Q502W7 563 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 KRTCAP3Q53RY4 240 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 PDZD4Q76G19 769 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 CPA6Q8N4T0 437 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 PCYOX1LQ8NBM8 494 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 RDH13Q8NBN7 331 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 TCEANC2Q96MN5 208 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 RUNDC3BQ96NL0 473 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 ESYT1Q9BSJ8 1104 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 PI4K2AQ9BTU6 479 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 TTLL2Q9BWV7 592 aa5.48□□□□□ -1.53
TRAPPC11-208ENST00000511955 PLA2G12BQ9BX93 195 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms