RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-231ENST00000510245 NCK2O43639 380 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 B4GALT4O60513 344 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 BAIAP3O94812 1187 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 PDE8BO95263 885 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 WNT11O96014 354 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 PDGFBP01127 241 aaPredicted RBP9.12□□□□□ -0.95
CAST-231ENST00000510245 PGK2P07205 417 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 RFC2P35250 354 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 JAG1P78504 1218 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 ITGA7Q13683 1181 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 SLBPQ14493 270 aaKnown RBP eCLIP9.12□□□□□ -0.95
CAST-231ENST00000510245 PUM3Q15397 648 aaKnown RBP9.12□□□□□ -0.95
CAST-231ENST00000510245 DDR2Q16832 855 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 MSMPQ1L6U9 139 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 SHROOM1Q2M3G4 852 aaPredicted RBP9.12□□□□□ -0.95
CAST-231ENST00000510245 PRAMEF13Q5VWM6 474 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 MCATQ8IVS2 390 aaKnown RBP9.12□□□□□ -0.95
CAST-231ENST00000510245 CRACR2BQ8N4Y2 399 aaPredicted RBP9.12□□□□□ -0.95
CAST-231ENST00000510245 MMP19Q99542 508 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 NSUN3Q9H649 340 aaKnown RBP9.12□□□□□ -0.95
CAST-231ENST00000510245 RPAP3Q9H6T3 665 aaPredicted RBP9.12□□□□□ -0.95
CAST-231ENST00000510245 SNTG2Q9NY99 539 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 PCDHB10Q9UN67 800 aa9.12□□□□□ -0.95
CAST-231ENST00000510245 MYO15AQ9UKN7 3530 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 TNKSO95271 1327 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 SALL1Q9NSC2 1324 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 DMXL1Q9Y485 3027 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 CABYRO75952 493 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 LMNAP02545 664 aaKnown RBP9.11□□□□□ -0.95
CAST-231ENST00000510245 CDCP2Q5VXM1 449 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 CXCL17Q6UXB2 119 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 UNC5AQ6ZN44 842 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 TMCO2Q7Z6W1 182 aaPredicted RBP9.11□□□□□ -0.95
CAST-231ENST00000510245 MRPL41Q8IXM3 137 aaKnown RBP9.11□□□□□ -0.95
CAST-231ENST00000510245 ZGPATQ8N5A5 531 aaKnown RBP9.11□□□□□ -0.95
CAST-231ENST00000510245 C19orf47Q8N9M1 422 aaKnown RBP9.11□□□□□ -0.95
CAST-231ENST00000510245 FAM181AQ8N9Y4 354 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 RIPOR3Q96MK2 946 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 SRPK1Q96SB4 655 aaKnown RBP9.11□□□□□ -0.95
CAST-231ENST00000510245 SEZ6LQ9BYH1 1024 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 GNL3LQ9NVN8 582 aaKnown RBP9.11□□□□□ -0.95
CAST-231ENST00000510245 SIRPGQ9P1W8 387 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 PI4KBQ9UBF8 816 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 MAPK8IP1Q9UQF2 711 aa9.11□□□□□ -0.95
CAST-231ENST00000510245 MROH7-TTC4A0A0A0MT08 1334 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 ZNF292O60281 2723 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 TNFRSF10CO14798 259 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 GJA9P57773 515 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 RHBDL3P58872 404 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 C6orf15Q6UXA7 325 aaPredicted RBP9.1□□□□□ -0.95
CAST-231ENST00000510245 ARMCX6Q7L4S7 300 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 PHACTR4Q8IZ21 702 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 VGLL2Q8N8G2 317 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 TMEM105Q8N8V8 129 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 DNAAF4Q8WXU2 420 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 DEPDC7Q96QD5 511 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 RAD9AQ99638 391 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 KIF2CQ99661 725 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 C17orf80Q9BSJ5 609 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 SIL1Q9H173 461 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 UPF3AQ9H1J1 476 aaKnown RBP9.1□□□□□ -0.95
CAST-231ENST00000510245 HOXC10Q9NYD6 342 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 CD207Q9UJ71 328 aa9.1□□□□□ -0.95
CAST-231ENST00000510245 DIS3Q9Y2L1 958 aaKnown RBP9.1□□□□□ -0.95
CAST-231ENST00000510245 LOC730098B7Z3J9 87 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 LRIG2O94898 1065 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 GJB6O95452 261 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 SUPT20HL2P0C7V6 817 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 CYP2C9P11712 490 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 SDHBP21912 280 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 LTBRP36941 435 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 YARSP54577 528 aaKnown RBP9.09□□□□□ -0.95
CAST-231ENST00000510245 WDR5P61964 334 aaKnown RBP9.09□□□□□ -0.95
CAST-231ENST00000510245 BEX3Q00994 111 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 COG2Q14746 738 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 ZNF792Q3KQV3 632 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 LRRC24Q50LG9 513 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 SLC6A19Q695T7 634 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 JAZF1Q86VZ6 243 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 SLFN12Q8IYM2 578 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 TAB3Q8N5C8 712 aaPredicted RBP9.09□□□□□ -0.95
CAST-231ENST00000510245 MB21D1Q8N884 522 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 C8orf58Q8NAV2 365 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 FOXQ1Q9C009 403 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 KIAA1683Q9H0B3 1180 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 DHX36Q9H2U1 1008 aaKnown RBP9.09□□□□□ -0.95
CAST-231ENST00000510245 ABCF2Q9UG63 623 aa9.09□□□□□ -0.95
CAST-231ENST00000510245 DDAH1O94760 285 aa9.08□□□□□ -0.96
CAST-231ENST00000510245 GH2P01242 217 aa9.08□□□□□ -0.96
CAST-231ENST00000510245 GP2P55259 537 aaKnown RBP9.08□□□□□ -0.96
CAST-231ENST00000510245 DLX2Q07687 328 aaPredicted RBP9.08□□□□□ -0.96
CAST-231ENST00000510245 PTPN21Q16825 1174 aa9.08□□□□□ -0.96
CAST-231ENST00000510245 MRM1Q6IN84 353 aaKnown RBP9.08□□□□□ -0.96
CAST-231ENST00000510245 NOP9Q86U38 636 aaKnown RBP9.08□□□□□ -0.96
CAST-231ENST00000510245 MSL3Q8N5Y2 521 aaKnown RBP9.08□□□□□ -0.96
CAST-231ENST00000510245 BAHD1Q8TBE0 780 aaPredicted RBP9.08□□□□□ -0.96
CAST-231ENST00000510245 SEMA4AQ9H3S1 761 aa9.08□□□□□ -0.96
CAST-231ENST00000510245 CCDC39Q9UFE4 941 aa9.08□□□□□ -0.96
CAST-231ENST00000510245 DENND2AQ9ULE3 1009 aa9.08□□□□□ -0.96
CAST-231ENST00000510245 MSRB2Q9Y3D2 182 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms