RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 FKBP1BP68106 108 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 PTK2Q05397 1052 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 ARHGEF19Q8IW93 802 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 GOLGA5Q8TBA6 731 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 PACSIN1Q9BY11 444 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 C17orf75Q9HAS0 396 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 TOPORSQ9NS56 1045 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-205ENST00000509860 CAPN6Q9Y6Q1 641 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 PTPRJQ12913 1337 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 A0A087X0T9 212 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 SSU72P8A0A1W2PR75 194 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 LRRIQ3A6PVS8 624 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-205ENST00000509860 FAM228BP0C875 321 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 CASQ1P31415 396 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 VAV2P52735 878 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 CAPSQ13938 189 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 NEDD9Q14511 834 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 SFMBT2Q5VUG0 894 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 CRELD2Q6UXH1 353 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-205ENST00000509860 STXBP4Q6ZWJ1 553 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 SEMA4DQ92854 862 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 ELMO3Q96BJ8 720 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 INTS2Q9H0H0 1204 aaKnown RBP13.59□□□□□ -0.23
PRDM16-205ENST00000509860 HAUS4Q9H6D7 363 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 MLXIPQ9HAP2 919 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 EMSYQ7Z589 1322 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 MAPK13O15264 365 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 FAM189A1O60320 539 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 SERPING1P05155 500 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 GTF2A1P52655 376 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-205ENST00000509860 PLCB4Q15147 1175 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 ZBTB41Q5SVQ8 909 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 GBP6Q6ZN66 633 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 XXYLT1Q8NBI6 393 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 MCPH1Q8NEM0 835 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 CCDC113Q9H0I3 377 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 HDAC6Q9UBN7 1215 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 GUCA1BQ9UMX6 200 aa13.59□□□□□ -0.23
PRDM16-205ENST00000509860 IGKV6-21A0A0C4DH24 114 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 RBM47A0AV96 593 aaKnown RBP13.58□□□□□ -0.24
PRDM16-205ENST00000509860 IGF2BP3O00425 579 aaKnown RBP eCLIP13.58□□□□□ -0.24
PRDM16-205ENST00000509860 STAT5BP51692 787 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 GRB14Q14449 540 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 EGFL6Q8IUX8 553 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 TRAPPC12Q8WVT3 735 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 JAKMIP2Q96AA8 810 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 HVCN1Q96D96 273 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 TMEM117Q9H0C3 514 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 FRMD4BQ9Y2L6 1034 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 STYXL1Q9Y6J8 313 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 F8VZ95 297 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 PJA2O43164 708 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 MAFO75444 373 aaPredicted RBP13.58□□□□□ -0.24
PRDM16-205ENST00000509860 MARK3P27448 753 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 VAMP7P51809 220 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 RAPGEF1Q13905 1077 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 SNRNP35Q16560 246 aaKnown RBP13.58□□□□□ -0.24
PRDM16-205ENST00000509860 CACNA2D4Q7Z3S7 1137 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 SEPT1Q8WYJ6 367 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 MFSD14AQ96MC6 490 aa13.58□□□□□ -0.24
PRDM16-205ENST00000509860 TADA3O75528 432 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 SLU7O95391 586 aaKnown RBP13.57□□□□□ -0.24
PRDM16-205ENST00000509860 ATP1A1P05023 1023 aaKnown RBP13.57□□□□□ -0.24
PRDM16-205ENST00000509860 ZNF516Q92618 1163 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 CCDC42Q96M95 316 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 DIS3Q9Y2L1 958 aaKnown RBP13.57□□□□□ -0.24
PRDM16-205ENST00000509860 URI1O94763 535 aaPredicted RBP13.57□□□□□ -0.24
PRDM16-205ENST00000509860 GJB1P08034 283 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 ZBTB48P10074 688 aaPredicted RBP13.57□□□□□ -0.24
PRDM16-205ENST00000509860 CYLC1P35663 651 aaPredicted RBP13.57□□□□□ -0.24
PRDM16-205ENST00000509860 PRKCIP41743 596 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 POLGP54098 1239 aaPredicted RBP13.57□□□□□ -0.24
PRDM16-205ENST00000509860 GPR142Q7Z601 462 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 RASAL3Q86YV0 1011 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 KAT5Q92993 513 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 ZBTB45Q96K62 511 aaPredicted RBP13.57□□□□□ -0.24
PRDM16-205ENST00000509860 CCDC43Q96MW1 224 aaKnown RBP13.57□□□□□ -0.24
PRDM16-205ENST00000509860 PNMA3Q9UL41 463 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 ABLIM1O14639 778 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 GCLMP48507 274 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 SNRPFP62306 86 aaKnown RBP13.57□□□□□ -0.24
PRDM16-205ENST00000509860 MYL7Q01449 175 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 ARID5AQ03989 594 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 NPLOC4Q8TAT6 608 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 LNX1Q8TBB1 728 aaPredicted RBP13.57□□□□□ -0.24
PRDM16-205ENST00000509860 RNPEPQ9H4A4 650 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 ZNHIT6Q9NWK9 470 aaKnown RBP13.57□□□□□ -0.24
PRDM16-205ENST00000509860 RSPH14Q9UHP6 348 aa13.57□□□□□ -0.24
PRDM16-205ENST00000509860 ENC1O14682 589 aa13.56□□□□□ -0.24
PRDM16-205ENST00000509860 ARHGAP29Q52LW3 1261 aa13.56□□□□□ -0.24
PRDM16-205ENST00000509860 CCDC122Q5T0U0 273 aa13.56□□□□□ -0.24
PRDM16-205ENST00000509860 SLC30A5Q8TAD4 765 aa13.56□□□□□ -0.24
PRDM16-205ENST00000509860 CARD6Q9BX69 1037 aa13.56□□□□□ -0.24
PRDM16-205ENST00000509860 DKC1O60832 514 aaKnown RBP eCLIP13.56□□□□□ -0.246e-6■■■■□ 21.7
PRDM16-205ENST00000509860 PIGRP01833 764 aa13.56□□□□□ -0.24
PRDM16-205ENST00000509860 WDR78Q5VTH9 848 aa13.56□□□□□ -0.24
PRDM16-205ENST00000509860 INTS8Q75QN2 995 aaKnown RBP13.56□□□□□ -0.24
PRDM16-205ENST00000509860 PLPPR4Q7Z2D5 763 aa13.56□□□□□ -0.24
PRDM16-205ENST00000509860 PARD3BQ8TEW8 1205 aa13.56□□□□□ -0.24
PRDM16-205ENST00000509860 ERO1AQ96HE7 468 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms