RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 POF1BQ8WVV4 589 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 P2RX5Q93086 422 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 ZNF396Q96N95 335 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 NACC1Q96RE7 527 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 PANK2Q9BZ23 570 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 RAB34Q9BZG1 259 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 BHMT2Q9H2M3 363 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 MINDY3Q9H8M7 445 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 CLDND1Q9NY35 253 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 PUF60Q9UHX1 559 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 DBR1Q9UK59 544 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 CIZ1Q9ULV3 898 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 HPSEQ9Y251 543 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 INPP5FQ9Y2H2 1132 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 TTC3P53804 2025 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 KIAA1671Q9BY89 1806 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 ARHGEF35A5YM69 484 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 TTLL13PA6NNM8 815 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 TNFRSF10AO00220 468 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 CUTAO60888 179 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 FGF18O76093 207 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 EYA4O95677 639 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 BMP15O95972 392 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 BMP1P13497 986 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 GLRA2P23416 452 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 CASP1P29466 404 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 CA8P35219 290 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 ARL2P36404 184 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 RAB27AP51159 221 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 CACNB1Q02641 598 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 KRT17Q04695 432 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 RNASELQ05823 741 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 ZRSR1Q15695 479 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 CSPP1Q1MSJ5 1256 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 TMEM132AQ24JP5 1023 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 RINT1Q6NUQ1 792 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 GLB1LQ6UWU2 654 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 C1orf186Q6ZWK4 172 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 COLGALT1Q8NBJ5 622 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 SPPL3Q8TCT6 385 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 LPPQ93052 612 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 PGBD4Q96DM1 585 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 AK8Q96MA6 479 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 ZNF558Q96NG5 402 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 CASD1Q96PB1 797 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 MRPL9Q9BYD2 267 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 IFT122Q9HBG6 1241 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 FAM105AQ9NUU6 356 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 CHMP5Q9NZZ3 219 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 HCSTQ9UBK5 93 aa9.68□□□□□ -0.86
PDLIM5-213ENST00000509357 FAM237AA0A1B0GTK4 181 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 LRRIQ4A6NIV6 560 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 H3BQ06 376 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 LINC00271P0C7V0 271 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 PLA2G4BP0C869 781 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 PDIA4P13667 645 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 CYP11B2P19099 503 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 MUTP22033 750 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 ALDH7A1P49419 539 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 KRT85P78386 507 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 RAD51AP2Q09MP3 1159 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 CAPSQ13938 189 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 CLLU1OSQ5K130 101 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 KRT79Q5XKE5 535 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 ATL3Q6DD88 541 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 PADI6Q6TGC4 694 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 KCNT2Q6UVM3 1135 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 TAS1R3Q7RTX0 852 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 RBM23Q86U06 439 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 GRAMD1CQ8IYS0 662 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 PDILTQ8N807 584 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 SYT2Q8N9I0 419 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 TMEM87AQ8NBN3 555 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 MCPH1Q8NEM0 835 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 RAD54LQ92698 747 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 STAMQ92783 540 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 PABPC5Q96DU9 382 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 SPATA32Q96LK8 384 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 NECAB3Q96P71 396 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 FAM193BQ96PV7 902 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 FIZ1Q96SL8 496 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 KIFC3Q9BVG8 833 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 FGFBP2Q9BYJ0 223 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 TRIM6Q9C030 488 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 GBP3Q9H0R5 595 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 POLR3FQ9H1D9 316 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 AGPAT5Q9NUQ2 364 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 USP20Q9Y2K6 914 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 PCDHB2Q9Y5E7 798 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 STK24Q9Y6E0 443 aa9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 SPTBN5Q9NRC6 3674 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-213ENST00000509357 ATG2AQ2TAZ0 1938 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 FNDC1Q4ZHG4 1894 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 A0A1B0GVL5 298 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 MYMKA6NI61 221 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 SFI1A8K8P3 1242 aa9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 ACTN4O43707 911 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 ZC3H11AO75152 810 aaKnown RBP eCLIP9.66□□□□□ -0.86
PDLIM5-213ENST00000509357 PFKFB1P16118 471 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms