RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 HCFC2Q9Y5Z7 792 aa12.18□□□□□ -0.46
RNF4-212ENST00000509258 C2orf71A6NGG8 1288 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 NT5C1B-RDH14C9J2C7 533 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 NEMFO60524 1076 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 CENPBP07199 599 aaPredicted RBP12.17□□□□□ -0.46
RNF4-212ENST00000509258 SRGAP2CP0DJJ0 459 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 SPATA31C1P0DKV0 1188 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 HOXA11P31270 313 aaPredicted RBP12.17□□□□□ -0.46
RNF4-212ENST00000509258 MCM7P33993 719 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 POLGP54098 1239 aaPredicted RBP12.17□□□□□ -0.46
RNF4-212ENST00000509258 ITIH3Q06033 890 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 ZNF410Q86VK4 478 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 MRPL43Q8N983 215 aaKnown RBP12.17□□□□□ -0.46
RNF4-212ENST00000509258 FEZF2Q8TBJ5 459 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 PIGOQ8TEQ8 1089 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 TMEM169Q96HH4 297 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 NAP1L4Q99733 375 aaKnown RBP12.17□□□□□ -0.46
RNF4-212ENST00000509258 APOL5Q9BWW9 433 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 ZSWIM4Q9H7M6 989 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 TSHZ2Q9NRE2 1034 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 AGPAT5Q9NUQ2 364 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 CDH22Q9UJ99 828 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 PIN4Q9Y237 131 aaKnown RBP12.17□□□□□ -0.46
RNF4-212ENST00000509258 DENND4AQ7Z401 1863 aa12.17□□□□□ -0.46
RNF4-212ENST00000509258 MARCH6O60337 910 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 MED24O75448 989 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 SP100P23497 879 aaPredicted RBP12.16□□□□□ -0.46
RNF4-212ENST00000509258 CA8P35219 290 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 BCAR1P56945 870 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 TCF15Q12870 199 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 MTMR3Q13615 1198 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 GIT2Q14161 759 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 ZNF174Q15697 407 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 TWF2Q6IBS0 349 aaKnown RBP12.16□□□□□ -0.46
RNF4-212ENST00000509258 AGMOQ6ZNB7 445 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 CATSPER4Q7RTX7 472 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 FERMT3Q86UX7 667 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 SLFN12Q8IYM2 578 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 TRAIPQ9BWF2 469 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 VN1R3Q9BXE9 311 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 IRF2BPLQ9H1B7 796 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 ADAM7Q9H2U9 754 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 BRMS1Q9HCU9 246 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 GPRC5CQ9NQ84 441 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 FAM105AQ9NUU6 356 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 DZANK1Q9NVP4 752 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 PCDHA12Q9UN75 941 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 SORCS3Q9UPU3 1222 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 PPME1Q9Y570 386 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 KMT2EQ8IZD2 1858 aa12.16□□□□□ -0.46
RNF4-212ENST00000509258 VWA8A3KMH1 1905 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.15□□□□□ -0.46
RNF4-212ENST00000509258 CLASP2O75122 1294 aaKnown RBP12.15□□□□□ -0.46
RNF4-212ENST00000509258 ZC3H11AO75152 810 aaKnown RBP eCLIP12.15□□□□□ -0.46
RNF4-212ENST00000509258 LYPLA2O95372 231 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 BAG4O95429 457 aaKnown RBP12.15□□□□□ -0.46
RNF4-212ENST00000509258 GLRA2P23416 452 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 RFC5P40937 340 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 RARRES1P49788 294 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 TOB1P50616 345 aaPredicted RBP12.15□□□□□ -0.46
RNF4-212ENST00000509258 RAB27AP51159 221 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 VCPP55072 806 aaKnown RBP12.15□□□□□ -0.46
RNF4-212ENST00000509258 CAPSQ13938 189 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 ECM1Q16610 540 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 AMHR2Q16671 573 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 GLB1LQ6UWU2 654 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 UBALD2Q8IYN6 164 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 C4orf32Q8N8J7 132 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 RNF149Q8NC42 400 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 KREMEN2Q8NCW0 462 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 FBXO18Q8NFZ0 1043 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 PSPC1Q8WXF1 523 aaKnown RBP12.15□□□□□ -0.46
RNF4-212ENST00000509258 SLC7A3Q8WY07 619 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 CPB2Q96IY4 423 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 C8orf76Q96K31 380 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 RIPOR3Q96MK2 946 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 PHOX2BQ99453 314 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 EIF2AQ9BY44 585 aaKnown RBP12.15□□□□□ -0.46
RNF4-212ENST00000509258 POMKQ9H5K3 350 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 NRDE2Q9H7Z3 1164 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 TBC1D13Q9NVG8 400 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 DNAJB4Q9UDY4 337 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 STK39Q9UEW8 545 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 INPP5FQ9Y2H2 1132 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 PCDHB2Q9Y5E7 798 aa12.15□□□□□ -0.46
RNF4-212ENST00000509258 MTCL1Q9Y4B5 1905 aaKnown RBP12.15□□□□□ -0.46
RNF4-212ENST00000509258 USP34Q70CQ2 3546 aa12.15□□□□□ -0.47
RNF4-212ENST00000509258 TTLL13PA6NNM8 815 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 TSPAN1O60635 241 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 OFD1O75665 1012 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 EDN1P05305 212 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 AVPR2P30518 371 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 ARL2P36404 184 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 MTHFRP42898 656 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 RBM25P49756 843 aaKnown RBP12.14□□□□□ -0.47
RNF4-212ENST00000509258 NUBP1P53384 320 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 PTENP60484 403 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 TRIM29Q14134 588 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 POTEGQ6S5H5 508 aa12.14□□□□□ -0.47
RNF4-212ENST00000509258 CDR2LQ86X02 465 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms