RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 EXOC7Q9UPT5 735 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 NOC2LQ9Y3T9 749 aaKnown RBP11.28□□□□□ -0.6
HTT-204ENST00000508321 PCDHB13Q9Y5F0 798 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 ZMYM2Q9UBW7 1377 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 RALGAPA2Q2PPJ7 1873 aa11.27□□□□□ -0.6
HTT-204ENST00000508321 COL4A6Q14031 1691 aa11.27□□□□□ -0.6
HTT-204ENST00000508321 ABHD14A-ACY1A0A1B0GW23 586 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 K7ERI5 159 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 ACKR2O00590 384 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 N4BP3O15049 544 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 KLRC4O43908 158 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 TSPAN1O60635 241 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 GCNT3O95395 438 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 PIGRP01833 764 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 SKIP12755 728 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 ZSCAN20P17040 1043 aaPredicted RBP11.27□□□□□ -0.61
HTT-204ENST00000508321 SYN1P17600 705 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 CD52P31358 61 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 PNOCQ13519 176 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 PRPF4BQ13523 1007 aaKnown RBP11.27□□□□□ -0.61
HTT-204ENST00000508321 HSP90AA2PQ14568 343 aaPredicted RBP11.27□□□□□ -0.61
HTT-204ENST00000508321 BMT2Q1RMZ1 405 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 KMT5BQ4FZB7 885 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 COBLL1Q53SF7 1204 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 NOTUMQ6P988 496 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 ZPBP2Q6X784 338 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 ZNF720Q7Z2F6 126 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 MAP4K3Q8IVH8 894 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 KIFC3Q9BVG8 833 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 TRAIPQ9BWF2 469 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 TMEM206Q9H813 350 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 AGO3Q9H9G7 860 aaKnown RBP11.27□□□□□ -0.61
HTT-204ENST00000508321 ST3GAL5Q9UNP4 418 aa11.27□□□□□ -0.61
HTT-204ENST00000508321 TTC3P53804 2025 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 SFI1A8K8P3 1242 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 HNRNPDLO14979 420 aaKnown RBP11.26□□□□□ -0.61
HTT-204ENST00000508321 MAGEA10P43363 369 aaPredicted RBP11.26□□□□□ -0.61
HTT-204ENST00000508321 FXR1P51114 621 aaKnown RBP eCLIP11.26□□□□□ -0.61
HTT-204ENST00000508321 SNRPFP62306 86 aaKnown RBP11.26□□□□□ -0.61
HTT-204ENST00000508321 NFX1Q12986 1120 aaKnown RBP11.26□□□□□ -0.61
HTT-204ENST00000508321 IKBKEQ14164 716 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 GPNMBQ14956 572 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 AMHR2Q16671 573 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 DCAF4L1Q3SXM0 396 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 CCDC183Q5T5S1 534 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 L1TD1Q5T7N2 865 aaKnown RBP11.26□□□□□ -0.61
HTT-204ENST00000508321 EPM2AIP1Q7L775 607 aaPredicted RBP11.26□□□□□ -0.61
HTT-204ENST00000508321 DEFB128Q7Z7B8 93 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 HACE1Q8IYU2 909 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 ACCSQ96QU6 501 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 ADPGKQ9BRR6 497 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 STRA6Q9BX79 667 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 TSPYL2Q9H2G4 693 aaPredicted RBP11.26□□□□□ -0.61
HTT-204ENST00000508321 MINDY3Q9H8M7 445 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 CDHR5Q9HBB8 845 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 CGNQ9P2M7 1197 aaKnown RBP11.26□□□□□ -0.61
HTT-204ENST00000508321 TBX20Q9UMR3 447 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 PIN4Q9Y237 131 aaKnown RBP11.26□□□□□ -0.61
HTT-204ENST00000508321 PCDHA5Q9Y5H7 936 aa11.26□□□□□ -0.61
HTT-204ENST00000508321 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.25□□□□□ -0.61
HTT-204ENST00000508321 A0A1B0GUA9 196 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 H0YGN5 161 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 KIAA0391O15091 583 aaKnown RBP11.25□□□□□ -0.61
HTT-204ENST00000508321 TOM1L1O75674 476 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 ARF4P18085 180 aaPredicted RBP11.25□□□□□ -0.61
HTT-204ENST00000508321 CASP1P29466 404 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 NMT1P30419 496 aaKnown RBP11.25□□□□□ -0.61
HTT-204ENST00000508321 BMP8BP34820 402 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 KCNJ6P48051 423 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 SARSP49591 514 aaKnown RBP11.25□□□□□ -0.61
HTT-204ENST00000508321 STIM1Q13586 685 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 TMEM132AQ24JP5 1023 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 ZNF658Q5TYW1 1059 aaPredicted RBP11.25□□□□□ -0.61
HTT-204ENST00000508321 SLC27A1Q6PCB7 646 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 RBM43Q6ZSC3 357 aaKnown RBP11.25□□□□□ -0.61
HTT-204ENST00000508321 DBF4BQ8NFT6 615 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 GOLGA5Q8TBA6 731 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 HERVK_113Q902F9 699 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 BICD1Q96G01 975 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 ZNF668Q96K58 619 aaPredicted RBP11.25□□□□□ -0.61
HTT-204ENST00000508321 SLC9A7Q96T83 725 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 GDF15Q99988 308 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 KIAA1468Q9P260 1216 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 TNFSF13BQ9Y275 285 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 CITO14578 2027 aa11.25□□□□□ -0.61
HTT-204ENST00000508321 A0A1W2PPC1 479 aa11.24□□□□□ -0.61
HTT-204ENST00000508321 HOXA2O43364 376 aa11.24□□□□□ -0.61
HTT-204ENST00000508321 FGBP02675 491 aa11.24□□□□□ -0.61
HTT-204ENST00000508321 AMHP03971 560 aa11.24□□□□□ -0.61
HTT-204ENST00000508321 MYBP10242 640 aa11.24□□□□□ -0.61
HTT-204ENST00000508321 LIG4P49917 911 aa11.24□□□□□ -0.61
HTT-204ENST00000508321 CASP5P51878 434 aa11.24□□□□□ -0.61
HTT-204ENST00000508321 DSC3Q14574 896 aa11.24□□□□□ -0.61
HTT-204ENST00000508321 NOLC1Q14978 699 aaKnown RBP eCLIP11.24□□□□□ -0.61
HTT-204ENST00000508321 KYAT1Q16773 422 aa11.24□□□□□ -0.61
HTT-204ENST00000508321 ATF7IP2Q5U623 682 aa11.24□□□□□ -0.61
HTT-204ENST00000508321 TWF2Q6IBS0 349 aaKnown RBP11.24□□□□□ -0.61
HTT-204ENST00000508321 SLFN12LQ6IEE8 588 aa11.24□□□□□ -0.61
HTT-204ENST00000508321 MPZL3Q6UWV2 235 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms