RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 RNF19AQ9NV58 838 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 PRMT7Q9NVM4 692 aaPredicted RBP20.06■□□□□ 0.8
NPHP4-210ENST00000506941 TMEM161AQ9NX61 479 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 ARHGAP28Q9P2N2 729 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 LRFN2Q9ULH4 789 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 USP20Q9Y2K6 914 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 PCDHB7Q9Y5E2 793 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 CNTNAP2Q9UHC6 1331 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 LINC01553A4QN01 128 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 SLC16A4O15374 487 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 POLR2DO15514 142 aaKnown RBP20.05■□□□□ 0.8
NPHP4-210ENST00000506941 PRKCBP05771 671 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 KRT18P05783 430 aaKnown RBP20.05■□□□□ 0.8
NPHP4-210ENST00000506941 STAG3L1P0CL83 205 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 CMA1P23946 247 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 AXLP30530 894 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 DYMQ7RTS9 669 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 DEFB123Q8N688 67 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 SPIRE2Q8WWL2 714 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 DDX12PQ92771 950 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 STAMQ92783 540 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 DNAJC19Q96DA6 116 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 PRIMPOLQ96LW4 560 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 NTPCRQ9BSD7 190 aaKnown RBP20.05■□□□□ 0.8
NPHP4-210ENST00000506941 SEMA6BQ9H3T3 888 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 ELAC1Q9H777 363 aaKnown RBP20.05■□□□□ 0.8
NPHP4-210ENST00000506941 SLC28A3Q9HAS3 691 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 KMT5AQ9NQR1 393 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 FAM105AQ9NUU6 356 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 FAM13BQ9NYF5 915 aa20.05■□□□□ 0.8
NPHP4-210ENST00000506941 PDCD11Q14690 1871 aaKnown RBP20.05■□□□□ 0.8
NPHP4-210ENST00000506941 PHLPP2Q6ZVD8 1323 aa20.04■□□□□ 0.8
NPHP4-210ENST00000506941 A0A1B0GVL5 298 aa20.04■□□□□ 0.8
NPHP4-210ENST00000506941 FGFR1P11362 822 aa20.04■□□□□ 0.8
NPHP4-210ENST00000506941 PFKFB1P16118 471 aa20.04■□□□□ 0.8
NPHP4-210ENST00000506941 LIG1P18858 919 aa20.04■□□□□ 0.8
NPHP4-210ENST00000506941 EFNA5P52803 228 aa20.04■□□□□ 0.8
NPHP4-210ENST00000506941 MAPK6Q16659 721 aa20.04■□□□□ 0.8
NPHP4-210ENST00000506941 NOTUMQ6P988 496 aa20.04■□□□□ 0.8
NPHP4-210ENST00000506941 CDR2LQ86X02 465 aaPredicted RBP20.04■□□□□ 0.8
NPHP4-210ENST00000506941 EIF2AQ9BY44 585 aaKnown RBP20.04■□□□□ 0.8
NPHP4-210ENST00000506941 KBTBD4Q9NVX7 518 aa20.04■□□□□ 0.8
NPHP4-210ENST00000506941 CHMP5Q9NZZ3 219 aa20.04■□□□□ 0.8
NPHP4-210ENST00000506941 KCNH3Q9ULD8 1083 aa20.04■□□□□ 0.8
NPHP4-210ENST00000506941 HPSEQ9Y251 543 aa20.04■□□□□ 0.8
NPHP4-210ENST00000506941 COL6A3P12111 3177 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 MEIS3P2A8K0S8 358 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 ACKR2O00590 384 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 FAM13AO94988 1023 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 TPRNQ4KMQ1 711 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 PAN2Q504Q3 1202 aaKnown RBP20.03■□□□□ 0.8
NPHP4-210ENST00000506941 CLLU1OSQ5K130 101 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 NT5DC1Q5TFE4 455 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 IQUBQ8NA54 791 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 RNF169Q8NCN4 708 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 TMEM161BQ8NDZ6 487 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 LPPQ93052 612 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 CUEDC2Q9H467 287 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 PARVGQ9HBI0 331 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 LARSQ9P2J5 1176 aaKnown RBP20.03■□□□□ 0.8
NPHP4-210ENST00000506941 PCDHB2Q9Y5E7 798 aa20.03■□□□□ 0.8
NPHP4-210ENST00000506941 FAM237AA0A1B0GTK4 181 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 A0A1B0GUA9 196 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 K7ERI5 159 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 ZNF623O75123 536 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 TBCAO75347 108 aaKnown RBP20.02■□□□□ 0.8
NPHP4-210ENST00000506941 LINC00271P0C7V0 271 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 MAPTP10636 758 aaKnown RBP20.02■□□□□ 0.8
NPHP4-210ENST00000506941 RAB27AP51159 221 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 NCKAP1LP55160 1127 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 PRPF4BQ13523 1007 aaKnown RBP20.02■□□□□ 0.8
NPHP4-210ENST00000506941 GRIN2CQ14957 1233 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 LONRF3Q496Y0 759 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 MYCT1Q8N699 235 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 SMG8Q8ND04 991 aaKnown RBP20.02■□□□□ 0.8
NPHP4-210ENST00000506941 CCDC51Q96ER9 411 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 FIZ1Q96SL8 496 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 TNMDQ9H2S6 317 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 GOLPH3LQ9H4A5 285 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 ZHX3Q9H4I2 956 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 PDZD7Q9H5P4 517 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 TMEM134Q9H6X4 195 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 CERS4Q9HA82 394 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 RNF216Q9NWF9 866 aaPredicted RBP20.02■□□□□ 0.8
NPHP4-210ENST00000506941 MTMR10Q9NXD2 777 aa20.02■□□□□ 0.8
NPHP4-210ENST00000506941 A0A1W2PQ27 194 aa20.01■□□□□ 0.79
NPHP4-210ENST00000506941 A0A1W2PQ64 194 aa20.01■□□□□ 0.79
NPHP4-210ENST00000506941 A0A1W2PQD8 194 aa20.01■□□□□ 0.79
NPHP4-210ENST00000506941 EPOPA6NHQ4 379 aa20.01■□□□□ 0.79
NPHP4-210ENST00000506941 ACTN4O43707 911 aaKnown RBP20.01■□□□□ 0.79
NPHP4-210ENST00000506941 EOMESO95936 686 aa20.01■□□□□ 0.79
NPHP4-210ENST00000506941 SMTNP53814 917 aa20.01■□□□□ 0.79
NPHP4-210ENST00000506941 NCBP1Q09161 790 aaKnown RBP20.01■□□□□ 0.79
NPHP4-210ENST00000506941 BTG3Q14201 252 aaPredicted RBP20.01■□□□□ 0.79
NPHP4-210ENST00000506941 EEF1DP3Q658K8 133 aa20.01■□□□□ 0.79
NPHP4-210ENST00000506941 SLC27A1Q6PCB7 646 aa20.01■□□□□ 0.79
NPHP4-210ENST00000506941 MRPL10Q7Z7H8 261 aaKnown RBP20.01■□□□□ 0.79
NPHP4-210ENST00000506941 SFR1Q86XK3 245 aa20.01■□□□□ 0.79
NPHP4-210ENST00000506941 CMTR2Q8IYT2 770 aaKnown RBP20.01■□□□□ 0.79
NPHP4-210ENST00000506941 GUCD1Q96NT3 240 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms