RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 CAPSQ13938 189 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 DSC3Q14574 896 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 FOXD4L6Q3SYB3 417 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-209ENST00000506630 HYIQ5T013 277 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 FOXD4L3Q6VB84 417 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-209ENST00000506630 FAM43BQ6ZT52 329 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-209ENST00000506630 SLC24A5Q71RS6 500 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 CRIPAKQ8N1N5 446 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 CALML4Q96GE6 196 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 PNMA5Q96PV4 448 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 PRRX2Q99811 253 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 CD207Q9UJ71 328 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 PCDHB7Q9Y5E2 793 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 PLXNA4Q9HCM2 1894 aa14.52□□□□□ -0.08
TCOF1-209ENST00000506630 LRRIQ4A6NIV6 560 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 C9IYK1 514 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 INO80B-WBP1J3KQ70 363 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 SSBP05455 408 aaKnown RBP eCLIP14.52□□□□□ -0.09
TCOF1-209ENST00000506630 CYP11B2P19099 503 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 UBA7P41226 1012 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 NDUFV1P49821 464 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 PKP1Q13835 747 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 BTG3Q14201 252 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-209ENST00000506630 STK38Q15208 465 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 PAN2Q504Q3 1202 aaKnown RBP14.52□□□□□ -0.09
TCOF1-209ENST00000506630 KCNK18Q7Z418 384 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 BMP8AQ7Z5Y6 402 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 CLP1Q92989 425 aaKnown RBP14.52□□□□□ -0.09
TCOF1-209ENST00000506630 PBXIP1Q96AQ6 731 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 SNX27Q96L92 541 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 ZNF396Q96N95 335 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-209ENST00000506630 PLVAPQ9BX97 442 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 MINDY3Q9H8M7 445 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 DACT1Q9NYF0 836 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 TRIP11Q15643 1979 aa14.52□□□□□ -0.09
TCOF1-209ENST00000506630 TBX10O75333 385 aa14.51□□□□□ -0.09
TCOF1-209ENST00000506630 DGKIO75912 1065 aa14.51□□□□□ -0.09
TCOF1-209ENST00000506630 ERLIN2O94905 339 aa14.51□□□□□ -0.09
TCOF1-209ENST00000506630 CSPG5O95196 566 aa14.51□□□□□ -0.09
TCOF1-209ENST00000506630 PTPN5P54829 565 aa14.51□□□□□ -0.09
TCOF1-209ENST00000506630 PTENP60484 403 aa14.51□□□□□ -0.09
TCOF1-209ENST00000506630 ADAM15Q13444 863 aa14.51□□□□□ -0.09
TCOF1-209ENST00000506630 TMEM119Q4V9L6 283 aa14.51□□□□□ -0.09
TCOF1-209ENST00000506630 SPECC1Q5M775 1068 aa14.51□□□□□ -0.09
TCOF1-209ENST00000506630 TWF2Q6IBS0 349 aaKnown RBP14.51□□□□□ -0.09
TCOF1-209ENST00000506630 SUGP1Q8IWZ8 645 aaKnown RBP14.51□□□□□ -0.09
TCOF1-209ENST00000506630 RNF169Q8NCN4 708 aa14.51□□□□□ -0.09
TCOF1-209ENST00000506630 ZNF689Q96CS4 500 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-209ENST00000506630 CSRNP2Q9H175 543 aa14.51□□□□□ -0.09
TCOF1-209ENST00000506630 CHST12Q9NRB3 414 aa14.51□□□□□ -0.09
TCOF1-209ENST00000506630 AGPAT5Q9NUQ2 364 aa14.51□□□□□ -0.09
TCOF1-209ENST00000506630 FBXO2Q9UK22 296 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-209ENST00000506630 SLC26A4O43511 780 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 PLCG1P19174 1290 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 GTF2F1P35269 517 aaKnown RBP eCLIP14.5□□□□□ -0.09
TCOF1-209ENST00000506630 NASPP49321 788 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-209ENST00000506630 POU5F1BQ06416 359 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 TRIM67Q6ZTA4 783 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 ECHDC2Q86YB7 292 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 ZBTB8OSQ8IWT0 167 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 BSNDQ8WZ55 320 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 P2RX5Q93086 422 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 IFT74Q96LB3 600 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 CLIC6Q96NY7 704 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 RUSC1Q9BVN2 902 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 POLD4Q9HCU8 107 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 ALG13Q9NP73 1137 aaKnown RBP14.5□□□□□ -0.09
TCOF1-209ENST00000506630 TMEM161AQ9NX61 479 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 TFIP11Q9UBB9 837 aaKnown RBP14.5□□□□□ -0.09
TCOF1-209ENST00000506630 HCSTQ9UBK5 93 aa14.5□□□□□ -0.09
TCOF1-209ENST00000506630 SRPRBQ9Y5M8 271 aaKnown RBP14.5□□□□□ -0.09
TCOF1-209ENST00000506630 CITO14578 2027 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 TMEM221A6NGB7 291 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 TBKBP1A7MCY6 615 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 M0R296 226 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 LINC01565O15544 149 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 PLA2G4BP0C869 781 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 FGFR1P11362 822 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 TXLNAP40222 546 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 NAMPTP43490 491 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 MBTD1Q05BQ5 628 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 SLC39A14Q15043 492 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 KARSQ15046 597 aaKnown RBP14.49□□□□□ -0.09
TCOF1-209ENST00000506630 PPP2R5AQ15172 486 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 NAALADL2Q58DX5 795 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 RINT1Q6NUQ1 792 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 IFNLR1Q8IU57 520 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-209ENST00000506630 CMTR2Q8IYT2 770 aaKnown RBP14.49□□□□□ -0.09
TCOF1-209ENST00000506630 KCTD17Q8N5Z5 321 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 KRI1Q8N9T8 703 aaKnown RBP14.49□□□□□ -0.09
TCOF1-209ENST00000506630 LINC00301Q8NCQ3 95 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 DEPTORQ8TB45 409 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 KIFAP3Q92845 792 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 NFKBIZQ9BYH8 718 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 ELAC1Q9H777 363 aaKnown RBP14.49□□□□□ -0.09
TCOF1-209ENST00000506630 DAXXQ9UER7 740 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-209ENST00000506630 PLAGL2Q9UPG8 496 aa14.49□□□□□ -0.09
TCOF1-209ENST00000506630 MYO7AQ13402 2215 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 A0A0U1RQF3 1178 aa14.48□□□□□ -0.09
TCOF1-209ENST00000506630 SPTLC2O15270 562 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms