RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 IGFBP4P22692 258 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 HOXA11P31270 313 aaPredicted RBP18.41■□□□□ 0.54
SNCA-209ENST00000506244 SMTNP53814 917 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 AMHR2Q16671 573 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 FOXD4L6Q3SYB3 417 aaPredicted RBP18.41■□□□□ 0.54
SNCA-209ENST00000506244 RRAGBQ5VZM2 374 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 GLB1LQ6UWU2 654 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 FOXD4L3Q6VB84 417 aaPredicted RBP18.41■□□□□ 0.54
SNCA-209ENST00000506244 APBB1IPQ7Z5R6 666 aaPredicted RBP18.41■□□□□ 0.54
SNCA-209ENST00000506244 MAFAQ8NHW3 353 aaPredicted RBP18.41■□□□□ 0.54
SNCA-209ENST00000506244 GDPD5Q8WTR4 605 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 CCDC113Q9H0I3 377 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 FZD8Q9H461 694 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 BLOC1S4Q9NUP1 217 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 LMCD1Q9NZU5 365 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 LARSQ9P2J5 1176 aaKnown RBP18.41■□□□□ 0.54
SNCA-209ENST00000506244 PCDHB2Q9Y5E7 798 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 EPOPA6NHQ4 379 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 N4BP3O15049 544 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 TBCAO75347 108 aaKnown RBP18.4■□□□□ 0.54
SNCA-209ENST00000506244 PLS3P13797 630 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 ARF4P18085 180 aaPredicted RBP18.4■□□□□ 0.54
SNCA-209ENST00000506244 POU3F3P20264 500 aaPredicted RBP18.4■□□□□ 0.54
SNCA-209ENST00000506244 SCP2P22307 547 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 BMPR1AP36894 532 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 STAT6P42226 847 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 NPTX2P47972 431 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 GATMP50440 423 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 PEX3P56589 373 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 KRT85P78386 507 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 DNM1Q05193 864 aaKnown RBP18.4■□□□□ 0.54
SNCA-209ENST00000506244 MAPK7Q13164 816 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 PRPF4BQ13523 1007 aaKnown RBP18.4■□□□□ 0.54
SNCA-209ENST00000506244 PTPROQ16827 1216 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 CSPP1Q1MSJ5 1256 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 NAALADL2Q58DX5 795 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 SPOUT1Q5T280 376 aaKnown RBP18.4■□□□□ 0.54
SNCA-209ENST00000506244 SLC27A1Q6PCB7 646 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 SPRED2Q7Z698 418 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 DAW1Q8N136 415 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 SPIRE2Q8WWL2 714 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 CPB2Q96IY4 423 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 ADPGKQ9BRR6 497 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 UBN1Q9NPG3 1134 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 KMT5AQ9NQR1 393 aa18.4■□□□□ 0.54
SNCA-209ENST00000506244 A0A1B0GUA9 196 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 H3BNC9 293 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 ACKR2O00590 384 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 LAG3P18627 525 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 NCLP19338 710 aaKnown RBP18.39■□□□□ 0.53
SNCA-209ENST00000506244 DDIT3P35638 169 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 ME1P48163 572 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 RAD51AP2Q09MP3 1159 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 ADGRE1Q14246 886 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 DHX8Q14562 1220 aaKnown RBP18.39■□□□□ 0.53
SNCA-209ENST00000506244 MCM6Q14566 821 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 CLLU1OSQ5K130 101 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 USP49Q70CQ1 688 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 MRPL10Q7Z7H8 261 aaKnown RBP18.39■□□□□ 0.53
SNCA-209ENST00000506244 URGCPQ8TCY9 931 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 HELQQ8TDG4 1101 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 P2RX5Q93086 422 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 CASD1Q96PB1 797 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 REEP2Q9BRK0 252 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 KIFC3Q9BVG8 833 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 RNF19AQ9NV58 838 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 PCDHB12Q9Y5F1 795 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 ZMYM2Q9UBW7 1377 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 MYH11P35749 1972 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 CHD7Q9P2D1 2997 aa18.39■□□□□ 0.53
SNCA-209ENST00000506244 KIAA1671Q9BY89 1806 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 K7ERI5 159 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 B4GALT5O43286 388 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 FAM13AO94988 1023 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 LINC00271P0C7V0 271 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 LIG1P18858 919 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 ABCD1P33897 745 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 NUCB2P80303 420 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 GPM6BQ13491 265 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 UBXN11Q5T124 520 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 LMAN2LQ9H0V9 348 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 CUEDC2Q9H467 287 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 TMEM134Q9H6X4 195 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 RSAD1Q9HA92 442 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 PARVGQ9HBI0 331 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 ARHGAP28Q9P2N2 729 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 IPPQ9Y573 584 aa18.38■□□□□ 0.53
SNCA-209ENST00000506244 ITGA4P13612 1032 aa18.37■□□□□ 0.53
SNCA-209ENST00000506244 PPM1AP35813 382 aa18.37■□□□□ 0.53
SNCA-209ENST00000506244 STRN3Q13033 797 aa18.37■□□□□ 0.53
SNCA-209ENST00000506244 DCAF4L1Q3SXM0 396 aa18.37■□□□□ 0.53
SNCA-209ENST00000506244 ARSHQ5FYA8 562 aa18.37■□□□□ 0.53
SNCA-209ENST00000506244 SV2BQ7L1I2 683 aa18.37■□□□□ 0.53
SNCA-209ENST00000506244 SLC17A8Q8NDX2 589 aa18.37■□□□□ 0.53
SNCA-209ENST00000506244 LRRC15Q8TF66 581 aa18.37■□□□□ 0.53
SNCA-209ENST00000506244 PYM1Q9BRP8 204 aaKnown RBP18.37■□□□□ 0.53
SNCA-209ENST00000506244 NTPCRQ9BSD7 190 aaKnown RBP18.37■□□□□ 0.53
SNCA-209ENST00000506244 MRPL4Q9BYD3 311 aaKnown RBP18.37■□□□□ 0.53
SNCA-209ENST00000506244 POLD4Q9HCU8 107 aa18.37■□□□□ 0.53
SNCA-209ENST00000506244 FAM13BQ9NYF5 915 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms