RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 MARCKSL1P49006 195 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 IFT88Q13099 833 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 DLGAP5Q15398 846 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 SLC9A9Q8IVB4 645 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 FMNL3Q8IVF7 1028 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 CPXCR1Q8N123 301 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 UBL4BQ8N7F7 174 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 IL31RAQ8NI17 732 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 ATP8B4Q8TF62 1192 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 KRT35Q92764 455 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 KAT2BQ92831 832 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 VCPKMTQ9H867 229 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 CNOT8Q9UFF9 292 aaKnown RBP8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 CCPG1Q9ULG6 757 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 DIS3Q9Y2L1 958 aaKnown RBP8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 UTRNP46939 3433 aa8.23□□□□□ -1.09
PPARGC1A-204ENST00000506055 TLDC2A0PJX2 215 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 GMNCA6NCL1 334 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 H0YHG0 523 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 NFIBO00712 420 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 SLC16A4O15374 487 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 SHBGP04278 402 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 P4HBP07237 508 aaKnown RBP8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 VCAM1P19320 739 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 HSPA1LP34931 641 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 PPP2R2AP63151 447 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 GPC5P78333 572 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 LLGL1Q15334 1064 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 DUPD1Q68J44 220 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 STYK1Q6J9G0 422 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 B3GNT9Q6UX72 402 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 MICALCLQ6ZW33 695 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 RHOT2Q8IXI1 618 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 PPM1KQ8N3J5 372 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 ELMO3Q96BJ8 720 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 CCDC127Q96BQ5 260 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 BTBD6Q96KE9 485 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 ACCSQ96QU6 501 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 RIT2Q99578 217 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 TMEM206Q9H813 350 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 GPRC5CQ9NQ84 441 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 HSPBP1Q9NZL4 362 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 COL20A1Q9P218 1284 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 ZNF70Q9UC06 446 aaPredicted RBP8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 SLC12A6Q9UHW9 1150 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 SYNPO2Q9UMS6 1093 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 ZBTB12Q9Y330 459 aaPredicted RBP8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 CAPN7Q9Y6W3 813 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 SMIM23A6NLE4 172 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 CYP26A1O43174 497 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 CPP00450 1065 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 COMTP21964 271 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 PEX3P56589 373 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 MAP2K1Q02750 393 aaPredicted RBP8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 TNIP1Q15025 636 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 HAUS6Q7Z4H7 955 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 SLC47A2Q86VL8 602 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 SPATS2Q86XZ4 545 aaKnown RBP8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 JAMLQ86YT9 394 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 OGFOD1Q8N543 542 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 XXYLT1Q8NBI6 393 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 MDM1Q8TC05 714 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 FAM151AQ8WW52 585 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 CYFIP2Q96F07 1278 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 PCDHB18PQ96TA0 734 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 POP1Q99575 1024 aaKnown RBP8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 EFCC1Q9HA90 598 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 PTPN22Q9Y2R2 807 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 SLX4Q8IY92 1834 aa8.22□□□□□ -1.09
PPARGC1A-204ENST00000506055 DHX15O43143 795 aaKnown RBP8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 TRAPPC3O43617 180 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 CAND2O75155 1236 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 PPFIA2O75334 1257 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 PLS3P13797 630 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 RFX1P22670 979 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 YWHABP31946 246 aaKnown RBP8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 RARRES1P49788 294 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 PMS2P54278 862 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 MKRN4PQ13434 485 aaPredicted RBP8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 C1orf220Q5T0J3 134 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 NOP9Q86U38 636 aaKnown RBP8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 FAM160B2Q86V87 743 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 UHMK1Q8TAS1 419 aaKnown RBP8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 FBXO25Q8TCJ0 367 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 PLEKHO2Q8TD55 490 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 CNKSR1Q969H4 720 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 PSMD1Q99460 953 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 ZDHHC18Q9NUE0 388 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 FEM1BQ9UK73 627 aa8.21□□□□□ -1.09
PPARGC1A-204ENST00000506055 TCRBV7S2A1N4TA0A589 114 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 CCDC169A6NNP5 214 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 RTN2O75298 545 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 MMEP08473 750 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 PYGMP11217 842 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 ALAS1P13196 640 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 CAP2P40123 477 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 QARSP47897 775 aaKnown RBP8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 MTMR1Q13613 665 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 DHX34Q14147 1143 aaKnown RBP8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 PPP2R5EQ16537 467 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms