RNA–Protein interactions for RNA: ENST00000505712.5

LINC01339-201, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 2 BASIC

Gene LINC01339, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-201ENST00000505712 POLD1P28340 1107 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 GJB2P29033 226 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 HOXC12P31275 282 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 ITGA1P56199 1179 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 TFCP2Q12800 502 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 PUM1Q14671 1186 aaKnown RBP eCLIP6.3□□□□□ -1.4
LINC01339-201ENST00000505712 ME3Q16798 604 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 TNNI3KQ59H18 835 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 ZSCAN30Q86W11 494 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 CCDC83Q8IWF9 413 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 LGI4Q8N135 537 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 PLBD2Q8NHP8 589 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 BTN2A2Q8WVV5 523 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 RBM15Q96T37 977 aaKnown RBP eCLIP6.3□□□□□ -1.4
LINC01339-201ENST00000505712 YIPF4Q9BSR8 244 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 FSD1Q9BTV5 496 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 TSPY26PQ9H489 355 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 LRP2BPQ9P2M1 347 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 DBNLQ9UJU6 430 aaKnown RBP6.3□□□□□ -1.4
LINC01339-201ENST00000505712 TPCN1Q9ULQ1 816 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 CNPY2Q9Y2B0 182 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 COA3Q9Y2R0 106 aaPredicted RBP6.3□□□□□ -1.4
LINC01339-201ENST00000505712 FPGT-TNNI3KV9GXZ4 949 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 SCN7AQ01118 1682 aa6.3□□□□□ -1.4
LINC01339-201ENST00000505712 MROH6A6NGR9 719 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 LETM1O95202 739 aaPredicted RBP6.29□□□□□ -1.4
LINC01339-201ENST00000505712 CPP00450 1065 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 SCG5P05408 212 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 SNRPB2P08579 225 aaKnown RBP6.29□□□□□ -1.4
LINC01339-201ENST00000505712 ATF4P18848 351 aaPredicted RBP6.29□□□□□ -1.4
LINC01339-201ENST00000505712 RPS6KB1P23443 525 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 KCNJ4P48050 445 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 PIP4K2AP48426 406 aaPredicted RBP6.29□□□□□ -1.4
LINC01339-201ENST00000505712 UBE2HP62256 183 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 CYP4F3Q08477 520 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 TOB2Q14106 344 aaPredicted RBP6.29□□□□□ -1.4
LINC01339-201ENST00000505712 ANKRD1Q15327 319 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 SV2CQ496J9 727 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 CCDC183Q5T5S1 534 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 C6orf15Q6UXA7 325 aaPredicted RBP6.29□□□□□ -1.4
LINC01339-201ENST00000505712 CEP68Q76N32 757 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 UBE3BQ7Z3V4 1068 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 ZNF589Q86UQ0 364 aaPredicted RBP6.29□□□□□ -1.4
LINC01339-201ENST00000505712 TTC9BQ8N6N2 239 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 TMEM169Q96HH4 297 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 CCDC140Q96MF4 163 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 SAMD11Q96NU1 681 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 LGR4Q9BXB1 951 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 ACTR10Q9NZ32 417 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 HMG20BQ9P0W2 317 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 ZNF652Q9Y2D9 606 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 ATP6V1DQ9Y5K8 247 aa6.29□□□□□ -1.4
LINC01339-201ENST00000505712 ZNF609O15014 1411 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 ERVV-2B6SEH9 535 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 SMAD7O15105 426 aaKnown RBP6.28□□□□□ -1.4
LINC01339-201ENST00000505712 ZNF500O60304 480 aaPredicted RBP6.28□□□□□ -1.4
LINC01339-201ENST00000505712 ITGAVP06756 1048 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 BCL6P41182 706 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 ECI1P42126 302 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 NKX3-2P78367 333 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 ADAM17P78536 824 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 GPR162Q16538 588 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 ACBD5Q5T8D3 534 aaPredicted RBP6.28□□□□□ -1.4
LINC01339-201ENST00000505712 LARP1BQ659C4 914 aaKnown RBP6.28□□□□□ -1.4
LINC01339-201ENST00000505712 BLOC1S2Q6QNY1 142 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 LMBR1LQ6UX01 489 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 ATG9AQ7Z3C6 839 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 NLRP10Q86W26 655 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 ZNF227Q86WZ6 799 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 TICAM2Q86XR7 235 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 CCDC103Q8IW40 242 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 FAM178BQ8IXR5 827 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 NECAB1Q8N987 351 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 EDC3Q96F86 508 aaKnown RBP6.28□□□□□ -1.4
LINC01339-201ENST00000505712 NAP1L5Q96NT1 182 aaPredicted RBP6.28□□□□□ -1.4
LINC01339-201ENST00000505712 SYT3Q9BQG1 590 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 TMPRSS5Q9H3S3 457 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 CAPN10Q9HC96 672 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 GPR108Q9NPR9 543 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 KIAA1522Q9P206 1035 aaPredicted RBP6.28□□□□□ -1.4
LINC01339-201ENST00000505712 NOL7Q9UMY1 257 aaKnown RBP6.28□□□□□ -1.4
LINC01339-201ENST00000505712 NRXN2Q9P2S2 1712 aa6.28□□□□□ -1.4
LINC01339-201ENST00000505712 TBX1O43435 398 aa6.27□□□□□ -1.41
LINC01339-201ENST00000505712 OFD1O75665 1012 aa6.27□□□□□ -1.41
LINC01339-201ENST00000505712 SSBP05455 408 aaKnown RBP eCLIP6.27□□□□□ -1.41
LINC01339-201ENST00000505712 MMP10P09238 476 aa6.27□□□□□ -1.41
LINC01339-201ENST00000505712 MSNP26038 577 aaKnown RBP6.27□□□□□ -1.41
LINC01339-201ENST00000505712 MCM5P33992 734 aa6.27□□□□□ -1.41
LINC01339-201ENST00000505712 STAT5AP42229 794 aa6.27□□□□□ -1.41
LINC01339-201ENST00000505712 CRKLP46109 303 aaKnown RBP6.27□□□□□ -1.41
LINC01339-201ENST00000505712 KRT32Q14532 448 aa6.27□□□□□ -1.41
LINC01339-201ENST00000505712 TESK1Q15569 626 aa6.27□□□□□ -1.41
LINC01339-201ENST00000505712 TBC1D10BQ4KMP7 808 aaPredicted RBP6.27□□□□□ -1.41
LINC01339-201ENST00000505712 PRR31Q5SQ13 230 aa6.27□□□□□ -1.41
LINC01339-201ENST00000505712 MCTP2Q6DN12 878 aa6.27□□□□□ -1.41
LINC01339-201ENST00000505712 STK32CQ86UX6 486 aa6.27□□□□□ -1.41
LINC01339-201ENST00000505712 VPS37DQ86XT2 251 aa6.27□□□□□ -1.41
LINC01339-201ENST00000505712 KBTBD3Q8NAB2 608 aa6.27□□□□□ -1.41
LINC01339-201ENST00000505712 FAM184AQ8NB25 1140 aa6.27□□□□□ -1.41
LINC01339-201ENST00000505712 TXNDC5Q8NBS9 432 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms