RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 WEE2P0C1S8 567 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 CTSAP10619 480 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 EPCAMP16422 314 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 ITIH3Q06033 890 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 SIGLEC14Q08ET2 396 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 BMS1Q14692 1282 aaKnown RBP13.63□□□□□ -0.23
SNHG4-202ENST00000505522 ANKRD1Q15327 319 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 PTPN21Q16825 1174 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 RARS2Q5T160 578 aaKnown RBP13.63□□□□□ -0.23
SNHG4-202ENST00000505522 IER5LQ5T953 404 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 KANK3Q6NY19 840 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 FERMT3Q86UX7 667 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 TPH2Q8IWU9 490 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 SLFN12Q8IYM2 578 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 RNF149Q8NC42 400 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 FEZF2Q8TBJ5 459 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 TCP11Q8WWU5 503 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 WASF1Q92558 559 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 GTF3C6Q969F1 213 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 PGBD4Q96DM1 585 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 ZSWIM4Q9H7M6 989 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 XPNPEP1Q9NQW7 623 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 TSHZ2Q9NRE2 1034 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 IRAK3Q9Y616 596 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 CARNS1A5YM72 827 aa13.62□□□□□ -0.23
SNHG4-202ENST00000505522 C2CD4DB7Z1M9 353 aa13.62□□□□□ -0.23
SNHG4-202ENST00000505522 GAS2O43903 313 aaKnown RBP13.62□□□□□ -0.23
SNHG4-202ENST00000505522 FOSBP53539 338 aa13.62□□□□□ -0.23
SNHG4-202ENST00000505522 PTPN14Q15678 1187 aa13.62□□□□□ -0.23
SNHG4-202ENST00000505522 CES5AQ6NT32 575 aa13.62□□□□□ -0.23
SNHG4-202ENST00000505522 SMG8Q8ND04 991 aaKnown RBP13.62□□□□□ -0.23
SNHG4-202ENST00000505522 PRSS33Q8NF86 280 aa13.62□□□□□ -0.23
SNHG4-202ENST00000505522 URGCPQ8TCY9 931 aa13.62□□□□□ -0.23
SNHG4-202ENST00000505522 SLC22A17Q8WUG5 538 aa13.62□□□□□ -0.23
SNHG4-202ENST00000505522 ASIC4Q96FT7 647 aa13.62□□□□□ -0.23
SNHG4-202ENST00000505522 MTRQ99707 1265 aa13.62□□□□□ -0.23
SNHG4-202ENST00000505522 EIF2AK1Q9BQI3 630 aaKnown RBP13.62□□□□□ -0.23
SNHG4-202ENST00000505522 RSAD1Q9HA92 442 aa13.62□□□□□ -0.23
SNHG4-202ENST00000505522 BRMS1Q9HCU9 246 aa13.62□□□□□ -0.23
SNHG4-202ENST00000505522 NR2E1Q9Y466 385 aa13.62□□□□□ -0.23
SNHG4-202ENST00000505522 BTBD18B2RXH4 712 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 ASAP2O43150 1006 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 TSPAN1O60635 241 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 JAK2O60674 1132 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 POMCP01189 267 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 NEFLP07196 543 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 NCLP19338 710 aaKnown RBP13.61□□□□□ -0.23
SNHG4-202ENST00000505522 MRE11P49959 708 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 PTENP60484 403 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 GIT2Q14161 759 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 FBXL6Q8N531 539 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 TMEM87AQ8NBN3 555 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 NSUN7Q8NE18 718 aaKnown RBP13.61□□□□□ -0.23
SNHG4-202ENST00000505522 CPB2Q96IY4 423 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 NECTIN4Q96NY8 510 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 HSD17B14Q9BPX1 270 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 EIF2AQ9BY44 585 aaKnown RBP13.61□□□□□ -0.23
SNHG4-202ENST00000505522 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 DZANK1Q9NVP4 752 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 PCDHA12Q9UN75 941 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 CNTNAP2Q9UHC6 1331 aa13.61□□□□□ -0.23
SNHG4-202ENST00000505522 A0A087WWV3 80 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 ERLIN2O94905 339 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 LYPLA2O95372 231 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 ALDH2P05091 517 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 SSBP05455 408 aaKnown RBP eCLIP13.6□□□□□ -0.23
SNHG4-202ENST00000505522 MTHFRP42898 656 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 MXD4Q14582 209 aaPredicted RBP13.6□□□□□ -0.23
SNHG4-202ENST00000505522 CALCRLQ16602 461 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 ZBTB33Q86T24 672 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 SUGP1Q8IWZ8 645 aaKnown RBP13.6□□□□□ -0.23
SNHG4-202ENST00000505522 KMT2EQ8IZD2 1858 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 KREMEN2Q8NCW0 462 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 ASAP3Q8TDY4 903 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 RIPOR3Q96MK2 946 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 FAM193BQ96PV7 902 aaPredicted RBP13.6□□□□□ -0.23
SNHG4-202ENST00000505522 TMEM175Q9BSA9 504 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 TTC12Q9H892 705 aaPredicted RBP13.6□□□□□ -0.23
SNHG4-202ENST00000505522 KANSL3Q9P2N6 904 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 FAN1Q9Y2M0 1017 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 IPPQ9Y573 584 aa13.6□□□□□ -0.23
SNHG4-202ENST00000505522 NRP1O14786 923 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 LILRB3O75022 631 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 PDGFBP01127 241 aaPredicted RBP13.59□□□□□ -0.23
SNHG4-202ENST00000505522 ITGA4P13612 1032 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 ARL2P36404 184 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 TXKP42681 527 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 VCPP55072 806 aaKnown RBP13.59□□□□□ -0.23
SNHG4-202ENST00000505522 MBTD1Q05BQ5 628 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 ST3GAL1Q11201 340 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 CAPSQ13938 189 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 KIAA1841Q6NSI8 718 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 TMC5Q6UXY8 1006 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 DIS3L2Q8IYB7 885 aaKnown RBP13.59□□□□□ -0.23
SNHG4-202ENST00000505522 PIGOQ8TEQ8 1089 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 KLHL5Q96PQ7 755 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 MTMR9Q96QG7 549 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 PHOX2BQ99453 314 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 SMOC2Q9H3U7 446 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 ANKEF1Q9NU02 776 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms