RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 DNAJC2Q99543 621 aaKnown RBP4.9□□□□□ -1.63
CPNE4-204ENST00000505331 NUSAP1Q9BXS6 441 aaKnown RBP4.9□□□□□ -1.63
CPNE4-204ENST00000505331 BRD9Q9H8M2 597 aa4.9□□□□□ -1.63
CPNE4-204ENST00000505331 PXMP2Q9NR77 195 aa4.9□□□□□ -1.63
CPNE4-204ENST00000505331 COL20A1Q9P218 1284 aa4.9□□□□□ -1.63
CPNE4-204ENST00000505331 SEPT9Q9UHD8 586 aaPredicted RBP4.9□□□□□ -1.63
CPNE4-204ENST00000505331 EVLQ9UI08 416 aaPredicted RBP4.9□□□□□ -1.63
CPNE4-204ENST00000505331 DBNLQ9UJU6 430 aaKnown RBP4.9□□□□□ -1.63
CPNE4-204ENST00000505331 ST3GAL5Q9UNP4 418 aa4.9□□□□□ -1.63
CPNE4-204ENST00000505331 SLC4A4Q9Y6R1 1079 aa4.9□□□□□ -1.63
CPNE4-204ENST00000505331 PIAS3Q9Y6X2 628 aa4.9□□□□□ -1.63
CPNE4-204ENST00000505331 KIAA1671Q9BY89 1806 aa4.9□□□□□ -1.63
CPNE4-204ENST00000505331 PLIN4Q96Q06 1357 aa4.9□□□□□ -1.63
CPNE4-204ENST00000505331 UBR5O95071 2799 aaPredicted RBP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 FBN3Q75N90 2809 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 TRABD2BA6NFA1 517 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 RRN3P2A6NIE6 340 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 PATE3B3GLJ2 98 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 E9PAM4 449 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 TEX28O15482 410 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 ZC3H11AO75152 810 aaKnown RBP eCLIP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 SSBP05455 408 aaKnown RBP eCLIP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 GALTP07902 379 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 FTH1P19P0C7X4 201 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 HSPD1P10809 573 aaKnown RBP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 PRKCSHP14314 528 aaPredicted RBP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 CR2P20023 1033 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 CCNE1P24864 410 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 EIF2S3P41091 472 aaKnown RBP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 MAPK8P45983 427 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 PXNP49023 591 aaPredicted RBP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 AK2P54819 239 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 IRX6P78412 446 aaPredicted RBP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 LY6DQ14210 128 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 NEDD9Q14511 834 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 CLLU1OSQ5K130 101 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 TTBK2Q6IQ55 1244 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 Q6ZS52 159 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 TOGARAM2Q6ZUX3 1019 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 TMPRSS7Q7RTY8 843 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 GRASPQ7Z6J2 395 aaPredicted RBP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 C11orf74Q86VG3 221 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 WDR63Q8IWG1 891 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 STK11IPQ8N1F8 1099 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 BCL7CQ8WUZ0 217 aaPredicted RBP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 ELSPBP1Q96BH3 223 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 RPS6KC1Q96S38 1066 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 PI4K2AQ9BTU6 479 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 BACH2Q9BYV9 841 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 SEMA4CQ9C0C4 833 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 POLMQ9NP87 494 aaPredicted RBP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 RBM12Q9NTZ6 932 aaKnown RBP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 C2orf42Q9NWW7 574 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 ERAP1Q9NZ08 941 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 APOBEC2Q9Y235 224 aaKnown RBP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 NOC2LQ9Y3T9 749 aaKnown RBP4.89□□□□□ -1.63
CPNE4-204ENST00000505331 PCDHA2Q9Y5H9 948 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 COL12A1Q99715 3063 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 ABCB11O95342 1321 aa4.89□□□□□ -1.63
CPNE4-204ENST00000505331 NAV1Q8NEY1 1877 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 ABCA12Q86UK0 2595 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 GAS2O43903 313 aaKnown RBP4.88□□□□□ -1.63
CPNE4-204ENST00000505331 PRDM1O75626 825 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 ZMYND10O75800 440 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 URODP06132 367 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 MYBP10242 640 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 MYCLP12524 364 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-204ENST00000505331 ENGP17813 658 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 RPL17P18621 184 aaKnown RBP4.88□□□□□ -1.63
CPNE4-204ENST00000505331 ELAVL4P26378 380 aaKnown RBP4.88□□□□□ -1.63
CPNE4-204ENST00000505331 HOXC13P31276 330 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 ATXN3P54252 364 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-204ENST00000505331 IGBP1P78318 339 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 FOXK1P85037 733 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 DSC3Q14574 896 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 NBR1Q14596 966 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 MAPK6Q16659 721 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 TRIM61Q5EBN2 209 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 ZNF746Q6NUN9 644 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-204ENST00000505331 CYFIP1Q7L576 1253 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 CYP2U1Q7Z449 544 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 VSIG10LQ86VR7 867 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 ECHDC2Q86YB7 292 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 NPAS3Q8IXF0 933 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 PLPP6Q8IY26 295 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 CAMKK1Q8N5S9 505 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 PNPLA1Q8N8W4 532 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 HELQQ8TDG4 1101 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 TBC1D5Q92609 795 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 TNPO1Q92973 898 aaKnown RBP4.88□□□□□ -1.63
CPNE4-204ENST00000505331 MED8Q96G25 268 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 PDCD2LQ9BRP1 358 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 TRMT61BQ9BVS5 477 aaKnown RBP4.88□□□□□ -1.63
CPNE4-204ENST00000505331 VN1R3Q9BXE9 311 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 PLA2G2FQ9BZM2 168 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 RXFP1Q9HBX9 757 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 ZNF334Q9HCZ1 680 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-204ENST00000505331 TLR7Q9NYK1 1049 aaKnown RBP4.88□□□□□ -1.63
CPNE4-204ENST00000505331 GDE1Q9NZC3 331 aa4.88□□□□□ -1.63
CPNE4-204ENST00000505331 KIAA1522Q9P206 1035 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms