RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 RIMBP2O15034 1052 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 CLDN3O15551 220 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 DGKIO75912 1065 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 RAD17O75943 681 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 SERPING1P05155 500 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 GNA11P29992 359 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 TBX2Q13207 712 aaPredicted RBP8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 C6orf118Q5T5N4 469 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 SYCE1Q8N0S2 351 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 CLMNQ96JQ2 1002 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 CENPKQ9BS16 269 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 C12orf65Q9H3J6 166 aaKnown RBP8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 POTEJP0CG39 1038 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 KRT10P13645 584 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 PTK2Q05397 1052 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 RINT1Q6NUQ1 792 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 CCHCR1Q8TD31 782 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 TMBIM4Q9HC24 238 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 GALNT8Q9NY28 637 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 CEP72Q9P209 647 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 LNPEPQ9UIQ6 1025 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 ARL2BPQ9Y2Y0 163 aa8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 RTCBQ9Y3I0 505 aaKnown RBP8.35□□□□□ -1.07
ATP2C1-208ENST00000504948 FAM200BP0CF97 657 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 PECAM1P16284 738 aaPredicted RBP8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 ADD2P35612 726 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 PRPHP41219 470 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 STRN3Q13033 797 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 DRP2Q13474 957 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 CUL1Q13616 776 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 RASGRF1Q13972 1273 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 PDCD2Q16342 344 aaPredicted RBP8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 KRT80Q6KB66 452 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 ARHGAP24Q8N264 748 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 USP38Q8NB14 1042 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.34□□□□□ -1.075e-8■■■■□ 20.2
ATP2C1-208ENST00000504948 UBE2TQ9NPD8 197 aaPredicted RBP8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 NDE1Q9NXR1 346 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 PAIP2BQ9ULR5 123 aaKnown RBP8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 C2orf71A6NGG8 1288 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 B2RBV5 119 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 CD19P15391 556 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 TMPRSS15P98073 1019 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 MMEL1Q495T6 779 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 SLC44A4Q53GD3 710 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 PPP1R15BQ5SWA1 713 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 SNX30Q5VWJ9 437 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 IZUMO2Q6UXV1 221 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 MTDHQ86UE4 582 aaKnown RBP8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 TRIM59Q8IWR1 403 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 ENAHQ8N8S7 591 aaPredicted RBP8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 CCDC89Q8N998 374 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 CCDC87Q9NVE4 849 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 RGL1Q9NZL6 768 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 TRAF3IP3Q9Y228 551 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 CACNA1FO60840 1977 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 CCDC78A2IDD5 438 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 ATP1A4Q13733 1029 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 WDR59Q6PJI9 974 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 NUDCD3Q8IVD9 361 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 PDZD8Q8NEN9 1154 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 PIGSQ96S52 555 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 STRBPQ96SI9 672 aaKnown RBP8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 SALL4Q9UJQ4 1053 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 ZMYND8Q9ULU4 1186 aaPredicted RBP8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 HPSEQ9Y251 543 aa8.34□□□□□ -1.07
ATP2C1-208ENST00000504948 SMNDC1O75940 238 aaKnown RBP eCLIP8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 KRT36O76013 467 aa8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 USP1O94782 785 aa8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 TDP2O95551 362 aa8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 APOEP02649 317 aa8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 CARTPTQ16568 116 aa8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 C16orf87Q6PH81 154 aa8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 TMTC3Q6ZXV5 915 aa8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 NANOGNBQ7Z5D8 188 aa8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 NEK8Q86SG6 692 aa8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 NBPF5PQ86XG9 351 aaPredicted RBP8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 ZSWIM2Q8NEG5 633 aa8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 MPP4Q96JB8 637 aa8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 EMILIN3Q9NT22 766 aa8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 TNRC6CQ9HCJ0 1690 aaKnown RBP8.34□□□□□ -1.08
ATP2C1-208ENST00000504948 CFAP73A6NFT4 308 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 MEI4A8MW99 385 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 TPST1O60507 370 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 CFBP00751 764 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 AFPP02771 609 aaKnown RBP8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 GSTT1P30711 240 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 AARSP49588 968 aaKnown RBP eCLIP8.33□□□□□ -1.081e-6■■■■■ 36.1
ATP2C1-208ENST00000504948 ADCY2Q08462 1091 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 ZBED8Q8IZ13 594 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 ADSSL1Q8N142 457 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 ANKRD35Q8N283 1001 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 CCDC33Q8N5R6 958 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 POU5F2Q8N7G0 328 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 MCUQ8NE86 351 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 ANKS1AQ92625 1134 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 DHTKD1Q96HY7 919 aaPredicted RBP8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 CNBD2Q96M20 576 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 MED15Q96RN5 788 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 TRIM56Q9BRZ2 755 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms