RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 POLIQ9UNA4 740 aa5.77□□□□□ -1.49
HTT-202ENST00000502820 INPP5FQ9Y2H2 1132 aa5.77□□□□□ -1.49
HTT-202ENST00000502820 U3KPZ7 1027 aaPredicted RBP5.77□□□□□ -1.49
HTT-202ENST00000502820 ATRXP46100 2492 aa5.77□□□□□ -1.49
HTT-202ENST00000502820 EP300Q09472 2414 aaPredicted RBP5.77□□□□□ -1.49
HTT-202ENST00000502820 MICAL3Q7RTP6 2002 aa5.77□□□□□ -1.49
HTT-202ENST00000502820 IGSF9BQ9UPX0 1349 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 TPRP12270 2363 aaKnown RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 PALM3A6NDB9 673 aaPredicted RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 GOLGA6L9A6NEM1 432 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 RRN3P2A6NIE6 340 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 OPLAHO14841 1288 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 INPPL1O15357 1258 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 FIBPO43427 364 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 PPP1R11O60927 126 aaPredicted RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 RFPL2O75678 378 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 TOP3BO95985 862 aaKnown RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 RETP07949 1114 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 PARP1P09874 1014 aaKnown RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 ZSCAN22P10073 491 aaPredicted RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 CASQ1P31415 396 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 USP8P40818 1118 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 NOVA1P51513 510 aaKnown RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 ANTXR2P58335 489 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 TROAPQ12815 778 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 MTAPQ13126 283 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 MLF2Q15773 248 aaPredicted RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 CSRP2Q16527 193 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 KIZQ2M2Z5 673 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 SLC44A4Q53GD3 710 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 MARCH8Q5T0T0 291 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 IFIT1BQ5T764 474 aaKnown RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 LAIR1Q6GTX8 287 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 RBM43Q6ZSC3 357 aaKnown RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 TPRG1Q6ZUI0 275 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 NLRX1Q86UT6 975 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 PPFIBP1Q86W92 1011 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 PLA2G4DQ86XP0 818 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 PALB2Q86YC2 1186 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 MB21D2Q8IYB1 491 aaPredicted RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 SLC39A11Q8N1S5 342 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 STAG2Q8N3U4 1231 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 METTL13Q8N6R0 699 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 SEPT1Q8WYJ6 367 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 SMG7Q92540 1137 aaKnown RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 CASD1Q96PB1 797 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 MYCBPQ99417 103 aaPredicted RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 OSMRQ99650 979 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 NCAPGQ9BPX3 1015 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 SCAND2PQ9GZW5 306 aaPredicted RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 LSG1Q9H089 658 aaKnown RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 TMEM117Q9H0C3 514 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 SMARCAD1Q9H4L7 1026 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 L2HGDHQ9H9P8 463 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 JMJD4Q9H9V9 463 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 SENP2Q9HC62 589 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 MAN1C1Q9NR34 630 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 FEZ2Q9UHY8 353 aaPredicted RBP5.76□□□□□ -1.49
HTT-202ENST00000502820 MAD2L2Q9UI95 211 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 ACACBO00763 2458 aa5.76□□□□□ -1.49
HTT-202ENST00000502820 CLUHO75153 1309 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 SPATA31C2B4DYI2 1134 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 C9IYK1 514 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 E7EWF7 191 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 GIPC1O14908 333 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 NCAM2O15394 837 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 HOXA2O43364 376 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 CYTH3O43739 400 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 KCNK5O95279 499 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 VTNP04004 478 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 H2AFXP16104 143 aaPredicted RBP5.75□□□□□ -1.49
HTT-202ENST00000502820 KLRC1P26715 233 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 HSD17B4P51659 736 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 NEK4P51957 841 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 STARD6P59095 220 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 SHC2P98077 582 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 ADCY1Q08828 1119 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 RAD51AP2Q09MP3 1159 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 TRDNQ13061 729 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 TUBB2AQ13885 445 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 PPP2R5DQ14738 602 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 GRM4Q14833 912 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 TPD52L1Q16890 204 aaPredicted RBP5.75□□□□□ -1.49
HTT-202ENST00000502820 ODR4Q5SWX8 454 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 ATL3Q6DD88 541 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 ELMSAN1Q6PJG2 1045 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 PARM1Q6UWI2 310 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 TMCO3Q6UWJ1 677 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 NYAP1Q6ZVC0 841 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 TMEM173Q86WV6 379 aaPredicted RBP5.75□□□□□ -1.49
HTT-202ENST00000502820 CKAP2LQ8IYA6 745 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 CELF5Q8N6W0 485 aaKnown RBP5.75□□□□□ -1.49
HTT-202ENST00000502820 ZBTB44Q8NCP5 570 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 CCDC150Q8NCX0 1101 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 NCOA7Q8NI08 942 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 SMARCC2Q8TAQ2 1214 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 IGDCC4Q8TDY8 1250 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 SLC22A17Q8WUG5 538 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 TMEM40Q8WWA1 233 aa5.75□□□□□ -1.49
HTT-202ENST00000502820 EXOC4Q96A65 974 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms