RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	GPRC5C	Q9NQ84	441 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	TYW1	Q9NV66	732 aa	Known RBP	11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	KANSL3	Q9P2N6	904 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	THEG	Q9P2T0	379 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	PLAGL2	Q9UPG8	496 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	PCDHB2	Q9Y5E7	798 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.63	□□□□□ -0.55
FXR1-222	ENST00000498658		E9PMD0	336 aa		11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	RBAK-RBAKDN	I3L0D1	243 aa		11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	TSPAN1	O60635	241 aa		11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	CDC25A	P30304	524 aa		11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	TXLNA	P40222	546 aa		11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	GATM	P50440	423 aa		11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	DMP1	Q13316	513 aa	Predicted RBP	11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	FAM187B	Q17R55	369 aa		11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	PDE12	Q6L8Q7	609 aa	Known RBP	11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	MRPL10	Q7Z7H8	261 aa	Known RBP	11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	SYT2	Q8N9I0	419 aa	Predicted RBP	11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	KLHL23	Q8NBE8	558 aa		11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	URGCP	Q8TCY9	931 aa		11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	ZNF396	Q96N95	335 aa	Predicted RBP	11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	CSRNP2	Q9H175	543 aa		11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	NSUN3	Q9H649	340 aa	Known RBP	11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	PUF60	Q9UHX1	559 aa	Known RBP	11.62	□□□□□ -0.55
FXR1-222	ENST00000498658	RBM19	Q9Y4C8	960 aa	Known RBP	11.62	□□□□□ -0.55
FXR1-222	ENST00000498658		A0A1B0GUA9	196 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	ACKR2	O00590	384 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	ATF7	P17544	494 aa	Predicted RBP	11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	ARF4	P18085	180 aa	Predicted RBP	11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	NCL	P19338	710 aa	Known RBP	11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	SCP2	P22307	547 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	GUCY2C	P25092	1073 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	ALDH7A1	P49419	539 aa	Known RBP	11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	CLCN6	P51797	869 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	MRPS5	P82675	430 aa	Known RBP	11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	KRT17	Q04695	432 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	PRPF4B	Q13523	1007 aa	Known RBP	11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	BMS1	Q14692	1282 aa	Known RBP	11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	AMHR2	Q16671	573 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	TMEM132A	Q24JP5	1023 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	TMEM119	Q4V9L6	283 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	NOMO2	Q5JPE7	1267 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	CLLU1OS	Q5K130	101 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	RINT1	Q6NUQ1	792 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	SLC27A1	Q6PCB7	646 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	C1orf186	Q6ZWK4	172 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	THNSL1	Q8IYQ7	743 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	HELQ	Q8TDG4	1101 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	SYMPK	Q92797	1274 aa	Known RBP	11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	HLA-C	Q95604	372 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	ZNF558	Q96NG5	402 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	ADPGK	Q9BRR6	497 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	CCSER1	Q9C0I3	900 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	FZD8	Q9H461	694 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	CWH43	Q9H720	699 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	RSAD1	Q9HA92	442 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	RNF19A	Q9NV58	838 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	STK39	Q9UEW8	545 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	CCDC39	Q9UFE4	941 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	LZTS1	Q9Y250	596 aa		11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	SRPRB	Q9Y5M8	271 aa	Known RBP	11.61	□□□□□ -0.55
FXR1-222	ENST00000498658	ZMYM2	Q9UBW7	1377 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	FSD2	A1L4K1	749 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658		H0YCG3	227 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658		K7ERI5	159 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	N4BP3	O15049	544 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	GRM6	O15303	877 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	OFD1	O75665	1012 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	FGF18	O76093	207 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	SSB	P05455	408 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	ITGB1	P05556	798 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	PLA2G4B	P0C869	781 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	ITGA4	P13612	1032 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	SMTN	P53814	917 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	PLCB3	Q01970	1234 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	RNASEL	Q05823	741 aa	Known RBP	11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	SLC39A14	Q15043	492 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	PTPA	Q15257	358 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	UBXN11	Q5T124	520 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	ATL3	Q6DD88	541 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	KCNT2	Q6UVM3	1135 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	LRRC55	Q6ZSA7	311 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	COLGALT1	Q8NBJ5	622 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	SPPL3	Q8TCT6	385 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	POF1B	Q8WVV4	589 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	PNMA5	Q96PV4	448 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	NTPCR	Q9BSD7	190 aa	Known RBP	11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	ALG13	Q9NP73	1137 aa	Known RBP	11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	SPG21	Q9NZD8	308 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	GIT1	Q9Y2X7	761 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	IPP	Q9Y573	584 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	CLIC4	Q9Y696	253 aa		11.6	□□□□□ -0.55
FXR1-222	ENST00000498658	REV3L	O60673	3130 aa		11.59	□□□□□ -0.55
FXR1-222	ENST00000498658	KIAA1671	Q9BY89	1806 aa		11.59	□□□□□ -0.55
FXR1-222	ENST00000498658	CCDC169	A6NNP5	214 aa		11.59	□□□□□ -0.55
FXR1-222	ENST00000498658	HIP1R	O75146	1068 aa		11.59	□□□□□ -0.55
FXR1-222	ENST00000498658	PRKCB	P05771	671 aa		11.59	□□□□□ -0.55
FXR1-222	ENST00000498658	ZSCAN22	P10073	491 aa	Predicted RBP	11.59	□□□□□ -0.55
FXR1-222	ENST00000498658	MARCKS	P29966	332 aa	Predicted RBP	11.59	□□□□□ -0.55

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