RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 HES6Q96HZ4 224 aa17.72■□□□□ 0.43
COL6A1-206ENST00000498614 UNC45AQ9H3U1 944 aa17.72■□□□□ 0.43
COL6A1-206ENST00000498614 FBXO28Q9NVF7 368 aa17.72■□□□□ 0.43
COL6A1-206ENST00000498614 UTP11Q9Y3A2 253 aaKnown RBP17.72■□□□□ 0.43
COL6A1-206ENST00000498614 EIF3DO15371 548 aaKnown RBP eCLIP17.72■□□□□ 0.43
COL6A1-206ENST00000498614 IFFO1Q0D2I5 559 aa17.72■□□□□ 0.43
COL6A1-206ENST00000498614 LACTB2Q53H82 288 aaPredicted RBP17.72■□□□□ 0.43
COL6A1-206ENST00000498614 GKAP1Q5VSY0 366 aaPredicted RBP17.72■□□□□ 0.43
COL6A1-206ENST00000498614 TLCD1Q96CP7 247 aa17.72■□□□□ 0.43
COL6A1-206ENST00000498614 BORCS6Q96GS4 357 aa17.72■□□□□ 0.43
COL6A1-206ENST00000498614 SGSM3Q96HU1 749 aa17.72■□□□□ 0.43
COL6A1-206ENST00000498614 ZNF577Q9BSK1 485 aa17.72■□□□□ 0.43
COL6A1-206ENST00000498614 RANBP17Q9H2T7 1088 aaKnown RBP17.72■□□□□ 0.43
COL6A1-206ENST00000498614 FAM114A2Q9NRY5 505 aa17.72■□□□□ 0.43
COL6A1-206ENST00000498614 A0A0A6YYK5 440 aaPredicted RBP17.71■□□□□ 0.43
COL6A1-206ENST00000498614 CAND2O75155 1236 aa17.71■□□□□ 0.43
COL6A1-206ENST00000498614 GFPT2O94808 682 aa17.71■□□□□ 0.43
COL6A1-206ENST00000498614 FGGP02679 453 aa17.71■□□□□ 0.43
COL6A1-206ENST00000498614 PSMC2P35998 433 aaKnown RBP17.71■□□□□ 0.43
COL6A1-206ENST00000498614 CYP2J2P51589 502 aa17.71■□□□□ 0.43
COL6A1-206ENST00000498614 CEP55Q53EZ4 464 aa17.71■□□□□ 0.43
COL6A1-206ENST00000498614 MIGA2Q7L4E1 593 aa17.71■□□□□ 0.43
COL6A1-206ENST00000498614 CCT6BQ92526 530 aa17.71■□□□□ 0.43
COL6A1-206ENST00000498614 TXLNGYQ9BZA5 131 aa17.71■□□□□ 0.43
COL6A1-206ENST00000498614 OSGEPQ9NPF4 335 aa17.71■□□□□ 0.43
COL6A1-206ENST00000498614 ZNF70Q9UC06 446 aaPredicted RBP17.71■□□□□ 0.43
COL6A1-206ENST00000498614 PNMA2Q9UL42 364 aa17.71■□□□□ 0.43
COL6A1-206ENST00000498614 TPX2Q9ULW0 747 aaKnown RBP17.71■□□□□ 0.43
COL6A1-206ENST00000498614 SYNPO2Q9UMS6 1093 aa17.71■□□□□ 0.43
COL6A1-206ENST00000498614 FAM170AA1A519 330 aa17.71■□□□□ 0.42
COL6A1-206ENST00000498614 DDX39AO00148 427 aaKnown RBP17.71■□□□□ 0.42
COL6A1-206ENST00000498614 PPFIA2O75334 1257 aa17.71■□□□□ 0.42
COL6A1-206ENST00000498614 SHBGP04278 402 aa17.71■□□□□ 0.42
COL6A1-206ENST00000498614 COPB2P35606 906 aa17.71■□□□□ 0.42
COL6A1-206ENST00000498614 GALCP54803 685 aa17.71■□□□□ 0.42
COL6A1-206ENST00000498614 NEDD9Q14511 834 aa17.71■□□□□ 0.42
COL6A1-206ENST00000498614 WLSQ5T9L3 541 aa17.71■□□□□ 0.42
COL6A1-206ENST00000498614 FAM178BQ8IXR5 827 aa17.71■□□□□ 0.42
COL6A1-206ENST00000498614 SYCE1Q8N0S2 351 aa17.71■□□□□ 0.42
COL6A1-206ENST00000498614 HVCN1Q96D96 273 aa17.71■□□□□ 0.42
COL6A1-206ENST00000498614 XPO6Q96QU8 1125 aaKnown RBP17.71■□□□□ 0.42
COL6A1-206ENST00000498614 FIZ1Q96SL8 496 aa17.71■□□□□ 0.42
COL6A1-206ENST00000498614 GLIS2Q9BZE0 524 aaPredicted RBP17.71■□□□□ 0.42
COL6A1-206ENST00000498614 FRMPD4Q14CM0 1322 aa17.7■□□□□ 0.42
COL6A1-206ENST00000498614 BUB1BO60566 1050 aaPredicted RBP17.7■□□□□ 0.42
COL6A1-206ENST00000498614 TRAF1Q13077 416 aa17.7■□□□□ 0.42
COL6A1-206ENST00000498614 ERMARDQ5T6L9 678 aa17.7■□□□□ 0.42
COL6A1-206ENST00000498614 ADAT2Q7Z6V5 191 aaKnown RBP17.7■□□□□ 0.42
COL6A1-206ENST00000498614 BANK1Q8NDB2 785 aa17.7■□□□□ 0.42
COL6A1-206ENST00000498614 GIMAP7Q8NHV1 300 aa17.7■□□□□ 0.42
COL6A1-206ENST00000498614 LNX1Q8TBB1 728 aaPredicted RBP17.7■□□□□ 0.42
COL6A1-206ENST00000498614 CHURC1Q8WUH1 139 aa17.7■□□□□ 0.42
COL6A1-206ENST00000498614 FAM151AQ8WW52 585 aa17.7■□□□□ 0.42
COL6A1-206ENST00000498614 FMO2Q99518 471 aa17.7■□□□□ 0.42
COL6A1-206ENST00000498614 PKD2L1Q9P0L9 805 aa17.7■□□□□ 0.42
COL6A1-206ENST00000498614 AMFRQ9UKV5 643 aa17.7■□□□□ 0.42
COL6A1-206ENST00000498614 MRPL11Q9Y3B7 192 aaKnown RBP17.7■□□□□ 0.42
COL6A1-206ENST00000498614 ODR4Q5SWX8 454 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 DCAF12L1Q5VU92 463 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 ZNF720Q7Z2F6 126 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 ARMC9Q7Z3E5 817 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 RPAINQ86UA6 219 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 VPS36Q86VN1 386 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 CEP57Q86XR8 500 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 OLIG1Q8TAK6 271 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 CHMP6Q96FZ7 201 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 FAM129AQ9BZQ8 928 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 EPB41L4BQ9H329 900 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 PPP1R9AQ9ULJ8 1098 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 CNTNAP1P78357 1384 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 PPP1R12BO60237 982 aaPredicted RBP17.69■□□□□ 0.42
COL6A1-206ENST00000498614 TRIM49P0CI25 452 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 TRIM49CP0CI26 452 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 ANXA13P27216 316 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 PLS1Q14651 629 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 KCTD17Q8N5Z5 321 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 SCLT1Q96NL6 688 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 NACC1Q96RE7 527 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 LXNQ9BS40 222 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 TMEM39BQ9GZU3 492 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 CNOT10Q9H9A5 744 aaKnown RBP17.69■□□□□ 0.42
COL6A1-206ENST00000498614 INTUQ9ULD6 942 aa17.69■□□□□ 0.42
COL6A1-206ENST00000498614 GTPBP10A4D1E9 387 aaKnown RBP17.68■□□□□ 0.42
COL6A1-206ENST00000498614 DDX3YO15523 660 aaKnown RBP17.68■□□□□ 0.42
COL6A1-206ENST00000498614 EVI5O60447 810 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 CTNND1O60716 968 aaKnown RBP17.68■□□□□ 0.42
COL6A1-206ENST00000498614 FMO5P49326 533 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 NPEPPSP55786 919 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 SF3A3Q12874 501 aaKnown RBP eCLIP17.68■□□□□ 0.42
COL6A1-206ENST00000498614 XRCC4Q13426 336 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 PRPF4BQ13523 1007 aaKnown RBP17.68■□□□□ 0.42
COL6A1-206ENST00000498614 CBWD6Q4V339 395 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 CBWD3Q5JTY5 395 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 CBWD5Q5RIA9 395 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 MAEAQ7L5Y9 396 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 LDHDQ86WU2 507 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 EHMT1Q9H9B1 1298 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 ZDHHC18Q9NUE0 388 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 ATP8B3O60423 1300 aa17.68■□□□□ 0.42
COL6A1-206ENST00000498614 IGSF9BQ9UPX0 1349 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms