RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 CCT5P48643 541 aa12.48□□□□□ -0.41
CDCA7-208ENST00000496441 SNRNP35Q16560 246 aaKnown RBP12.48□□□□□ -0.41
CDCA7-208ENST00000496441 GLE1Q53GS7 698 aaKnown RBP12.48□□□□□ -0.41
CDCA7-208ENST00000496441 DCAF12L1Q5VU92 463 aa12.48□□□□□ -0.41
CDCA7-208ENST00000496441 ANO5Q75V66 913 aa12.48□□□□□ -0.41
CDCA7-208ENST00000496441 AGBL3Q8NEM8 1001 aa12.48□□□□□ -0.41
CDCA7-208ENST00000496441 UHMK1Q8TAS1 419 aaKnown RBP12.48□□□□□ -0.41
CDCA7-208ENST00000496441 KRT35Q92764 455 aa12.48□□□□□ -0.41
CDCA7-208ENST00000496441 WRNIP1Q96S55 665 aa12.48□□□□□ -0.41
CDCA7-208ENST00000496441 PDCD2LQ9BRP1 358 aa12.48□□□□□ -0.41
CDCA7-208ENST00000496441 MKNK1Q9BUB5 465 aa12.48□□□□□ -0.41
CDCA7-208ENST00000496441 TMEM117Q9H0C3 514 aa12.48□□□□□ -0.41
CDCA7-208ENST00000496441 TAOK3Q9H2K8 898 aa12.48□□□□□ -0.41
CDCA7-208ENST00000496441 TBC1D12O60347 775 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 ZBED4O75132 1171 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 PPP1R37O75864 691 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 KRT5P13647 590 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 GUCY1A3Q02108 690 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 SF3A3Q12874 501 aaKnown RBP eCLIP12.47□□□□□ -0.413e-6■■■□□ 17.7
CDCA7-208ENST00000496441 PCNX4Q63HM2 1172 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 INTS8Q75QN2 995 aaKnown RBP12.47□□□□□ -0.41
CDCA7-208ENST00000496441 NLRX1Q86UT6 975 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 LMO3Q8TAP4 145 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 BCAS4Q8TDM0 211 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 BSNDQ8WZ55 320 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 RFFLQ8WZ73 363 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 POMGNT1Q8WZA1 660 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 ALG3Q92685 438 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 SEMA4DQ92854 862 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 PBKQ96KB5 322 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 TEPSINQ96N21 525 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 TAF1DQ9H5J8 278 aaPredicted RBP12.47□□□□□ -0.41
CDCA7-208ENST00000496441 ERVK-5Q9HDB9 667 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 PIM2Q9P1W9 311 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 UBIAD1Q9Y5Z9 338 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 DOCK5Q9H7D0 1870 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 SMIM23A6NLE4 172 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 HNRNPDLO14979 420 aaKnown RBP12.47□□□□□ -0.41
CDCA7-208ENST00000496441 MMEP08473 750 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 CNGA1P29973 690 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 ADSSP30520 456 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 GMPSP49915 693 aaPredicted RBP12.47□□□□□ -0.41
CDCA7-208ENST00000496441 IRAK1P51617 712 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 PPFIA1Q13136 1202 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 PPP2R5AQ15172 486 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 MSL3Q8N5Y2 521 aaKnown RBP12.47□□□□□ -0.41
CDCA7-208ENST00000496441 OLIG1Q8TAK6 271 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 RNPC3Q96LT9 517 aaKnown RBP12.47□□□□□ -0.41
CDCA7-208ENST00000496441 TMEM206Q9H813 350 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 KMT5AQ9NQR1 393 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 PXMP2Q9NR77 195 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 SEPT9Q9UHD8 586 aaPredicted RBP12.47□□□□□ -0.41
CDCA7-208ENST00000496441 PTPN22Q9Y2R2 807 aa12.47□□□□□ -0.41
CDCA7-208ENST00000496441 ATAD5Q96QE3 1844 aa12.46□□□□□ -0.41
CDCA7-208ENST00000496441 DNAH12Q6ZR08 3092 aa12.46□□□□□ -0.41
CDCA7-208ENST00000496441 HARSP12081 509 aaKnown RBP12.46□□□□□ -0.41
CDCA7-208ENST00000496441 CTNNA1P35221 906 aaKnown RBP12.46□□□□□ -0.41
CDCA7-208ENST00000496441 NPTX2P47972 431 aa12.46□□□□□ -0.41
CDCA7-208ENST00000496441 C1orf220Q5T0J3 134 aa12.46□□□□□ -0.41
CDCA7-208ENST00000496441 DAB2IPQ5VWQ8 1189 aa12.46□□□□□ -0.41
CDCA7-208ENST00000496441 SYCE1Q8N0S2 351 aa12.46□□□□□ -0.41
CDCA7-208ENST00000496441 KCND2Q9NZV8 630 aa12.46□□□□□ -0.41
CDCA7-208ENST00000496441 PGAP2Q9UHJ9 254 aa12.46□□□□□ -0.41
CDCA7-208ENST00000496441 RRP15Q9Y3B9 282 aaKnown RBP12.46□□□□□ -0.41
CDCA7-208ENST00000496441 ALG6Q9Y672 507 aa12.46□□□□□ -0.41
CDCA7-208ENST00000496441 VWA5AO00534 786 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 NR3C2P08235 984 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 PSMC5P62195 406 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 DMP1Q13316 513 aaPredicted RBP12.46□□□□□ -0.42
CDCA7-208ENST00000496441 SF3B2Q13435 895 aaKnown RBP12.46□□□□□ -0.42
CDCA7-208ENST00000496441 SEZ6Q53EL9 994 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 ODF2Q5BJF6 829 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 LLGL2Q6P1M3 1020 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 NOP9Q86U38 636 aaKnown RBP12.46□□□□□ -0.42
CDCA7-208ENST00000496441 TAS1R2Q8TE23 839 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 SCFD2Q8WU76 684 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 PIK3R5Q8WYR1 880 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 CAVIN3Q969G5 261 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 PCDHB18PQ96TA0 734 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 FAM213AQ9BRX8 229 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 CNOT7Q9UIV1 285 aaKnown RBP12.46□□□□□ -0.42
CDCA7-208ENST00000496441 FBXL5Q9UKA1 691 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 SYNPO2Q9UMS6 1093 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 ATP8A1Q9Y2Q0 1164 aa12.46□□□□□ -0.42
CDCA7-208ENST00000496441 WDR64B1ANS9 1081 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 MTERF2Q49AM1 385 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 EEPD1Q7L9B9 569 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 ACTRT1Q8TDG2 376 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 LRRC4CQ9HCJ2 640 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 TBC1D22BQ9NU19 505 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 GOLGA8KD6RF30 607 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 MYO1CO00159 1063 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 ZNF862O60290 1169 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 TMEM253P0C7T8 217 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 CCDC172P0C7W6 258 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 HSD17B3P37058 310 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 SMTNP53814 917 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 IRX5P78411 483 aaPredicted RBP12.45□□□□□ -0.42
CDCA7-208ENST00000496441 TATDN2Q93075 761 aa12.45□□□□□ -0.42
CDCA7-208ENST00000496441 C18orf8Q96DM3 657 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms