RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 MAP4K1Q92918 833 aa7.86□□□□□ -1.15
CHCHD3-206ENST00000496427 TNPO1Q92973 898 aaKnown RBP7.86□□□□□ -1.15
CHCHD3-206ENST00000496427 TCEANC2Q96MN5 208 aa7.86□□□□□ -1.15
CHCHD3-206ENST00000496427 ADAM7Q9H2U9 754 aa7.86□□□□□ -1.15
CHCHD3-206ENST00000496427 ELAC1Q9H777 363 aaKnown RBP7.86□□□□□ -1.15
CHCHD3-206ENST00000496427 NGRNQ9NPE2 291 aaKnown RBP7.86□□□□□ -1.15
CHCHD3-206ENST00000496427 RIC8AQ9NPQ8 531 aa7.86□□□□□ -1.15
CHCHD3-206ENST00000496427 SPG21Q9NZD8 308 aa7.86□□□□□ -1.15
CHCHD3-206ENST00000496427 LIMD1Q9UGP4 676 aa7.86□□□□□ -1.15
CHCHD3-206ENST00000496427 PUF60Q9UHX1 559 aaKnown RBP7.86□□□□□ -1.15
CHCHD3-206ENST00000496427 DBR1Q9UK59 544 aaKnown RBP7.86□□□□□ -1.15
CHCHD3-206ENST00000496427 AKT3Q9Y243 479 aa7.86□□□□□ -1.15
CHCHD3-206ENST00000496427 TRIP11Q15643 1979 aa7.86□□□□□ -1.15
CHCHD3-206ENST00000496427 CACNA1IQ9P0X4 2223 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 IGLV3-22A0A075B6J6 115 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 MEIS1O00470 390 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 SLC27A2O14975 620 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 DHX15O43143 795 aaKnown RBP7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 ZC3H11AO75152 810 aaKnown RBP eCLIP7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 CSDE1O75534 798 aaKnown RBP7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 MCM5P33992 734 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 CLCN1P35523 988 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 PPM1AP35813 382 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 ZNF76P36508 570 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 SREBF1P36956 1147 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 MTHFRP42898 656 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 ID4P47928 161 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 CLK2P49760 499 aaKnown RBP7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 SLC26A2P50443 739 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 BCAR1P56945 870 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 NLRP11P59045 1033 aaKnown RBP7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 GUCA2AQ02747 115 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 KRT17Q04695 432 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 EFCAB12Q6NXP0 572 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 MIS18BP1Q6P0N0 1132 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 TMC5Q6UXY8 1006 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 LINC01465Q8N7H1 131 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 MRPL43Q8N983 215 aaKnown RBP7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 LPPQ93052 612 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 NKD2Q969F2 451 aaPredicted RBP7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 TMEM87BQ96K49 555 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 NECTIN4Q96NY8 510 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 ZBP1Q9H171 429 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 EVA1BQ9NVM1 165 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 GABBR1Q9UBS5 961 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 SLC12A7Q9Y666 1083 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 VWA8A3KMH1 1905 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 PDCD11Q14690 1871 aaKnown RBP7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 CACNA1AO00555 2505 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 ZNF292O60281 2723 aa7.85□□□□□ -1.15
CHCHD3-206ENST00000496427 WDR87Q6ZQQ6 2873 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 SMCO2A6NFE2 343 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 MEIS3P2A8K0S8 358 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 NARSO43776 548 aaKnown RBP7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 B4GALT3O60512 393 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 CXCL14O95715 111 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 EOMESO95936 686 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 CALM1P0DP23 149 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 CALM2P0DP24 149 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 CALM3P0DP25 149 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 MYBP10242 640 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 ZSCAN20P17040 1043 aaPredicted RBP7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 NPR3P17342 541 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 LIFRP42702 1097 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 GPC3P51654 580 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 ITIH3Q06033 890 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 DRP2Q13474 957 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 UGCGQ16739 394 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 MCTP2Q6DN12 878 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 APOA5Q6Q788 366 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 ZDHHC14Q8IZN3 488 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 VPS52Q8N1B4 723 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 FANCBQ8NB91 859 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 TMEM169Q96HH4 297 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 SCLT1Q96NL6 688 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 MAP7D2Q96T17 732 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 ZNF577Q9BSK1 485 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 VN1R3Q9BXE9 311 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 LSG1Q9H089 658 aaKnown RBP7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 GBP3Q9H0R5 595 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 ADAMTS10Q9H324 1103 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 INPP5FQ9Y2H2 1132 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 MAFBQ9Y5Q3 323 aaPredicted RBP7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 RALGAPA1Q6GYQ0 2036 aa7.84□□□□□ -1.15
CHCHD3-206ENST00000496427 NOTCH4Q99466 2003 aa7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 MED19A0JLT2 244 aaPredicted RBP7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 TMEM150BA6NC51 233 aa7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 IPO5O00410 1097 aaKnown RBP7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 ZNF862O60290 1169 aa7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 ADH1CP00326 375 aa7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 SSBP05455 408 aaKnown RBP eCLIP7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 AOC1P19801 751 aa7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 EIF4BP23588 611 aaKnown RBP7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 CDC27P30260 824 aa7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 FOXK2Q01167 660 aa7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 PRKCEQ02156 737 aa7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 AP3B2Q13367 1082 aa7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 NNTQ13423 1086 aa7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 ANGPT1Q15389 498 aa7.83□□□□□ -1.16
CHCHD3-206ENST00000496427 CREB3L3Q68CJ9 461 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms