RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.26□□□□□ -0.29
ATG3-209ENST00000496423 DNAJB4Q9UDY4 337 aa13.26□□□□□ -0.29
ATG3-209ENST00000496423 BAZ2BQ9UIF8 2168 aaKnown RBP13.26□□□□□ -0.29
ATG3-209ENST00000496423 IGKV6D-21A0A0A0MT36 114 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 A0A0D9SFI3 127 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 TAF4O00268 1085 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 NR1I2O75469 434 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 C22orf31O95567 290 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 ZNF806P0C7X5 589 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 SPATA31D3P0C874 917 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 MYBP10242 640 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 RBM25P49756 843 aaKnown RBP13.25□□□□□ -0.29
ATG3-209ENST00000496423 CREMQ03060 361 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 EFCAB12Q6NXP0 572 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 SPATA31D4Q6ZUB0 917 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 PALB2Q86YC2 1186 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 ST13P5Q8NFI4 369 aaPredicted RBP13.25□□□□□ -0.29
ATG3-209ENST00000496423 BCL7CQ8WUZ0 217 aaPredicted RBP13.25□□□□□ -0.29
ATG3-209ENST00000496423 PIBF1Q8WXW3 757 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 HERC2P3Q9BVR0 1158 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 ADAM33Q9BZ11 813 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 INO80BQ9C086 356 aaPredicted RBP13.25□□□□□ -0.29
ATG3-209ENST00000496423 CHRDQ9H2X0 955 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 RXFP1Q9HBX9 757 aa13.25□□□□□ -0.29
ATG3-209ENST00000496423 MYH9P35579 1960 aaKnown RBP13.24□□□□□ -0.29
ATG3-209ENST00000496423 GREB1Q4ZG55 1949 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 CYTH3O43739 400 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 OFD1O75665 1012 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 TDGF1P13385 188 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 DARSP14868 501 aaKnown RBP13.24□□□□□ -0.29
ATG3-209ENST00000496423 FOXC1Q12948 553 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 TRDNQ13061 729 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 PSAPL1Q6NUJ1 521 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 SWSAP1Q6NVH7 229 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 ABHD15Q6UXT9 468 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 LONP2Q86WA8 852 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 NLRP7Q8WX94 980 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 ZCCHC14Q8WYQ9 949 aaKnown RBP13.24□□□□□ -0.29
ATG3-209ENST00000496423 MAP4K1Q92918 833 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 LOXL4Q96JB6 756 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 VN1R3Q9BXE9 311 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 GCOM2Q9BZD3 368 aaPredicted RBP13.24□□□□□ -0.29
ATG3-209ENST00000496423 RXFP3Q9NSD7 469 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 TCEAL9Q9UHQ7 104 aa13.24□□□□□ -0.29
ATG3-209ENST00000496423 NDRG2Q9UN36 371 aaKnown RBP13.24□□□□□ -0.29
ATG3-209ENST00000496423 CNOT1A5YKK6 2376 aaKnown RBP13.24□□□□□ -0.29
ATG3-209ENST00000496423 NRP1O14786 923 aa13.23□□□□□ -0.29
ATG3-209ENST00000496423 HRO43593 1189 aa13.23□□□□□ -0.29
ATG3-209ENST00000496423 XYLBO75191 536 aa13.23□□□□□ -0.29
ATG3-209ENST00000496423 ZMYND10O75800 440 aa13.23□□□□□ -0.29
ATG3-209ENST00000496423 HNRNPA1P09651 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
ATG3-209ENST00000496423 CHRM1P11229 460 aaPredicted RBP13.23□□□□□ -0.29
ATG3-209ENST00000496423 SFPQP23246 707 aaKnown RBP eCLIP13.23□□□□□ -0.29
ATG3-209ENST00000496423 CLCN3P51790 818 aa13.23□□□□□ -0.29
ATG3-209ENST00000496423 NMIQ13287 307 aaPredicted RBP13.23□□□□□ -0.29
ATG3-209ENST00000496423 GRASPQ7Z6J2 395 aaPredicted RBP13.23□□□□□ -0.29
ATG3-209ENST00000496423 ZNF589Q86UQ0 364 aaPredicted RBP13.23□□□□□ -0.29
ATG3-209ENST00000496423 FGF13Q92913 245 aa13.23□□□□□ -0.29
ATG3-209ENST00000496423 LPPQ93052 612 aa13.23□□□□□ -0.29
ATG3-209ENST00000496423 PCDHA6Q9UN73 950 aa13.23□□□□□ -0.29
ATG3-209ENST00000496423 PCDHA8Q9Y5H6 950 aa13.23□□□□□ -0.29
ATG3-209ENST00000496423 SETXQ7Z333 2677 aaKnown RBP13.23□□□□□ -0.29
ATG3-209ENST00000496423 TGM5O43548 720 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 ZNF623O75123 536 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 NOVA1P51513 510 aaKnown RBP13.22□□□□□ -0.29
ATG3-209ENST00000496423 SART3Q15020 963 aaKnown RBP13.22□□□□□ -0.29
ATG3-209ENST00000496423 SEC23AQ15436 765 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 LONRF3Q496Y0 759 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 LIN9Q5TKA1 542 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 CATIPQ7Z7H3 387 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 ZNF280BQ86YH2 543 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 GPR65Q8IYL9 337 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 FAM160A2Q8N612 972 aaPredicted RBP13.22□□□□□ -0.29
ATG3-209ENST00000496423 DNASE1L2Q92874 299 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 FAM167AQ96KS9 214 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 KXD1Q9BQD3 176 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 ARRDC1-AS1Q9H2J1 176 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 LMAN1LQ9HAT1 526 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 HEBP1Q9NRV9 189 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 NRBP2Q9NSY0 501 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 FAM105AQ9NUU6 356 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 FNIP2Q9P278 1114 aa13.22□□□□□ -0.29
ATG3-209ENST00000496423 ZBTB42B2RXF5 422 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 CHURC1-FNTBB4DL54 471 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 AXIN1O15169 862 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 ECI2O75521 394 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 SMARCA1P28370 1054 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 ZNF76P36508 570 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 OR1G1P47890 313 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 FNTBP49356 437 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 GPC3P51654 580 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 DSG1Q02413 1049 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 FZD5Q13467 585 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 SF3A2Q15428 464 aaKnown RBP13.21□□□□□ -0.29
ATG3-209ENST00000496423 PPM1LQ5SGD2 360 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 DAB2IPQ5VWQ8 1189 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 RNF43Q68DV7 783 aa13.21□□□□□ -0.29
ATG3-209ENST00000496423 TRMT1LQ7Z2T5 733 aaKnown RBP13.21□□□□□ -0.29
ATG3-209ENST00000496423 CCDC60Q8IWA6 550 aaPredicted RBP13.21□□□□□ -0.29
ATG3-209ENST00000496423 LZTS2Q9BRK4 669 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms