RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 LAMTOR4Q0VGL1 99 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 CTTNQ14247 550 aaKnown RBP16.04■□□□□ 0.16
CXCL12-208ENST00000496375 BMS1Q14692 1282 aaKnown RBP16.04■□□□□ 0.16
CXCL12-208ENST00000496375 SAFBQ15424 915 aaKnown RBP eCLIP16.04■□□□□ 0.16
CXCL12-208ENST00000496375 TRIM67Q6ZTA4 783 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 SRGAP1Q7Z6B7 1085 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 SLFN12Q8IYM2 578 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 PGBD4Q96DM1 585 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 ZSWIM4Q9H7M6 989 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 MINDY3Q9H8M7 445 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 SMC3Q9UQE7 1217 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 PCDHB2Q9Y5E7 798 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-208ENST00000496375 TMEM221A6NGB7 291 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 M0R296 226 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 GAS2O43903 313 aaKnown RBP16.03■□□□□ 0.16
CXCL12-208ENST00000496375 GALTP07902 379 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 SP100P23497 879 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-208ENST00000496375 SPIRE1Q08AE8 756 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 EMC2Q15006 297 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 TPRNQ4KMQ1 711 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 XKR9Q5GH70 373 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 OTUD6AQ7L8S5 288 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 VPS52Q8N1B4 723 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 TCP11Q8WWU5 503 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 AUTS2Q8WXX7 1259 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 IGSF21Q96ID5 467 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 GBP3Q9H0R5 595 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 ZBP1Q9H171 429 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 KCNH6Q9H252 994 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 DNAJB4Q9UDY4 337 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 CDH22Q9UJ99 828 aa16.03■□□□□ 0.16
CXCL12-208ENST00000496375 CARNS1A5YM72 827 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 ZBTB39O15060 712 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 ASAP2O43150 1006 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 SLC11A1P49279 550 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 GUCY1B3Q02153 619 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 ORC2Q13416 577 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-208ENST00000496375 AGMOQ6ZNB7 445 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 BMP8AQ7Z5Y6 402 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 DDX53Q86TM3 631 aaKnown RBP16.02■□□□□ 0.16
CXCL12-208ENST00000496375 FERMT3Q86UX7 667 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 ZNF280BQ86YH2 543 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 TPH2Q8IWU9 490 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 TMEM87AQ8NBN3 555 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 RNF149Q8NC42 400 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 URGCPQ8TCY9 931 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 BCL7CQ8WUZ0 217 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-208ENST00000496375 FBXL18Q96ME1 805 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 MTRQ99707 1265 aa16.02■□□□□ 0.16
CXCL12-208ENST00000496375 B4GALT3O60512 393 aa16.01■□□□□ 0.15
CXCL12-208ENST00000496375 SLITRK3O94933 977 aa16.01■□□□□ 0.15
CXCL12-208ENST00000496375 CTSAP10619 480 aa16.01■□□□□ 0.15
CXCL12-208ENST00000496375 HOXA11P31270 313 aaPredicted RBP16.01■□□□□ 0.15
CXCL12-208ENST00000496375 TRAPPC10P48553 1259 aa16.01■□□□□ 0.15
CXCL12-208ENST00000496375 AFF1P51825 1210 aaKnown RBP16.01■□□□□ 0.15
CXCL12-208ENST00000496375 FOSBP53539 338 aa16.01■□□□□ 0.15
CXCL12-208ENST00000496375 UBXN11Q5T124 520 aa16.01■□□□□ 0.15
CXCL12-208ENST00000496375 CES5AQ6NT32 575 aa16.01■□□□□ 0.15
CXCL12-208ENST00000496375 MRPL10Q7Z7H8 261 aaKnown RBP16.01■□□□□ 0.15
CXCL12-208ENST00000496375 NOSTRINQ8IVI9 506 aa16.01■□□□□ 0.15
CXCL12-208ENST00000496375 HSCBQ8IWL3 235 aa16.01■□□□□ 0.15
CXCL12-208ENST00000496375 PBXIP1Q96AQ6 731 aa16.01■□□□□ 0.15
CXCL12-208ENST00000496375 EIF2AK1Q9BQI3 630 aaKnown RBP16.01■□□□□ 0.15
CXCL12-208ENST00000496375 ADAM7Q9H2U9 754 aa16.01■□□□□ 0.15
CXCL12-208ENST00000496375 RSAD1Q9HA92 442 aa16.01■□□□□ 0.15
CXCL12-208ENST00000496375 CNTNAP2Q9UHC6 1331 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 PIEZO1Q92508 2521 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 DDHD2O94830 711 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 NHLH1Q02575 133 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 ITIH3Q06033 890 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 SIGLEC14Q08ET2 396 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 GIT2Q14161 759 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 CALCRLQ16602 461 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 PTPN21Q16825 1174 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 ALYREFQ86V81 257 aaKnown RBP16■□□□□ 0.15
CXCL12-208ENST00000496375 NECTIN4Q96NY8 510 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 VN1R3Q9BXE9 311 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 POMKQ9H5K3 350 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 XPNPEP1Q9NQW7 623 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 PCDHA12Q9UN75 941 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 IRAK3Q9Y616 596 aa16■□□□□ 0.15
CXCL12-208ENST00000496375 NEMFO60524 1076 aa15.99■□□□□ 0.15
CXCL12-208ENST00000496375 ERLIN2O94905 339 aa15.99■□□□□ 0.15
CXCL12-208ENST00000496375 EPCAMP16422 314 aa15.99■□□□□ 0.15
CXCL12-208ENST00000496375 NCLP19338 710 aaKnown RBP15.99■□□□□ 0.15
CXCL12-208ENST00000496375 PDCP20941 246 aa15.99■□□□□ 0.15
CXCL12-208ENST00000496375 MXD4Q14582 209 aaPredicted RBP15.99■□□□□ 0.15
CXCL12-208ENST00000496375 RARS2Q5T160 578 aaKnown RBP15.99■□□□□ 0.15
CXCL12-208ENST00000496375 ZBTB33Q86T24 672 aa15.99■□□□□ 0.15
CXCL12-208ENST00000496375 SUGP1Q8IWZ8 645 aaKnown RBP15.99■□□□□ 0.15
CXCL12-208ENST00000496375 C12orf76Q8N812 135 aaPredicted RBP15.99■□□□□ 0.15
CXCL12-208ENST00000496375 FAM193BQ96PV7 902 aaPredicted RBP15.99■□□□□ 0.15
CXCL12-208ENST00000496375 HSD17B14Q9BPX1 270 aa15.99■□□□□ 0.15
CXCL12-208ENST00000496375 TTC12Q9H892 705 aaPredicted RBP15.99■□□□□ 0.15
CXCL12-208ENST00000496375 DZANK1Q9NVP4 752 aa15.99■□□□□ 0.15
CXCL12-208ENST00000496375 NR2E1Q9Y466 385 aa15.99■□□□□ 0.15
CXCL12-208ENST00000496375 WNT7AO00755 349 aa15.98■□□□□ 0.15
CXCL12-208ENST00000496375 TSPAN1O60635 241 aa15.98■□□□□ 0.15
CXCL12-208ENST00000496375 LYPLA2O95372 231 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms