RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 ERVFC1P60507 584 aa16.03■□□□□ 0.16
PDAP1-204ENST00000496335 NCBP1Q09161 790 aaKnown RBP16.03■□□□□ 0.16
PDAP1-204ENST00000496335 PCBP1Q15365 356 aaKnown RBP eCLIP16.03■□□□□ 0.163e-11■■□□□ 12.1
PDAP1-204ENST00000496335 CSPP1Q1MSJ5 1256 aa16.03■□□□□ 0.16
PDAP1-204ENST00000496335 NOMO2Q5JPE7 1267 aa16.03■□□□□ 0.16
PDAP1-204ENST00000496335 ARL6IP4Q66PJ3 421 aaKnown RBP16.03■□□□□ 0.16
PDAP1-204ENST00000496335 NOTUMQ6P988 496 aa16.03■□□□□ 0.16
PDAP1-204ENST00000496335 SMG8Q8ND04 991 aaKnown RBP16.03■□□□□ 0.16
PDAP1-204ENST00000496335 ADAMTS19Q8TE59 1207 aa16.03■□□□□ 0.16
PDAP1-204ENST00000496335 PGBD4Q96DM1 585 aa16.03■□□□□ 0.16
PDAP1-204ENST00000496335 PNMA5Q96PV4 448 aa16.03■□□□□ 0.16
PDAP1-204ENST00000496335 MRPL9Q9BYD2 267 aaKnown RBP16.03■□□□□ 0.16
PDAP1-204ENST00000496335 CSRNP2Q9H175 543 aa16.03■□□□□ 0.16
PDAP1-204ENST00000496335 TBC1D13Q9NVG8 400 aa16.03■□□□□ 0.16
PDAP1-204ENST00000496335 HES2Q9Y543 173 aa16.03■□□□□ 0.16
PDAP1-204ENST00000496335 BDP1A6H8Y1 2624 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 TTLL13PA6NNM8 815 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 H3BQ06 376 aaPredicted RBP16.02■□□□□ 0.16
PDAP1-204ENST00000496335 NCLP19338 710 aaKnown RBP16.02■□□□□ 0.16
PDAP1-204ENST00000496335 BCAR1P56945 870 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 SF3A1Q15459 793 aaKnown RBP16.02■□□□□ 0.16
PDAP1-204ENST00000496335 CDCA2Q69YH5 1023 aaPredicted RBP16.02■□□□□ 0.16
PDAP1-204ENST00000496335 FAM173BQ6P4H8 233 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 RBM23Q86U06 439 aaKnown RBP16.02■□□□□ 0.16
PDAP1-204ENST00000496335 MICAL1Q8TDZ2 1067 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 PABPC5Q96DU9 382 aaKnown RBP16.02■□□□□ 0.16
PDAP1-204ENST00000496335 NECAB3Q96P71 396 aaPredicted RBP16.02■□□□□ 0.16
PDAP1-204ENST00000496335 KIFC3Q9BVG8 833 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 GBP3Q9H0R5 595 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 RNF39Q9H2S5 420 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 RSAD1Q9HA92 442 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 TLR9Q9NR96 1032 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 CLDND1Q9NY35 253 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 SPG21Q9NZD8 308 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 USP20Q9Y2K6 914 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 IPPQ9Y573 584 aa16.02■□□□□ 0.16
PDAP1-204ENST00000496335 MYH11P35749 1972 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 LINC01565O15544 149 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 B4GALT3O60512 393 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 ZC3H11AO75152 810 aaKnown RBP eCLIP16.01■□□□□ 0.152e-12■□□□□ 10.8
PDAP1-204ENST00000496335 ITGA4P13612 1032 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 LIG1P18858 919 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 NAMPTP43490 491 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 PLCB3Q01970 1234 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 UBE3AQ05086 875 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 GRIN1Q05586 938 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 RNASELQ05823 741 aaKnown RBP16.01■□□□□ 0.15
PDAP1-204ENST00000496335 RESTQ13127 1097 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 COL19A1Q14993 1142 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 ZNF280BQ86YH2 543 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 ZBTB8OSQ8IWT0 167 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 SLC39A11Q8N1S5 342 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 MRPS27Q92552 414 aaKnown RBP16.01■□□□□ 0.15
PDAP1-204ENST00000496335 SNX21Q969T3 373 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 CCDC51Q96ER9 411 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 RUSC1Q9BVN2 902 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 APOL6Q9BWW8 343 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 FZD8Q9H461 694 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 NRDE2Q9H7Z3 1164 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 CLIC4Q9Y696 253 aa16.01■□□□□ 0.15
PDAP1-204ENST00000496335 CNTNAP2Q9UHC6 1331 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 A0A1B0GUA9 196 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 NPTXRO95502 500 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 POMCP01189 267 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 EDN1P05305 212 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 SSBP05455 408 aaKnown RBP eCLIP16■□□□□ 0.15
PDAP1-204ENST00000496335 PPM1AP35813 382 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 LTBRP36941 435 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 NRIP1P48552 1158 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 ALDH7A1P49419 539 aaKnown RBP16■□□□□ 0.15
PDAP1-204ENST00000496335 DLX2Q07687 328 aaPredicted RBP16■□□□□ 0.15
PDAP1-204ENST00000496335 CTC1Q2NKJ3 1217 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 LEXMQ3ZCV2 418 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 HYIQ5T013 277 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 RINT1Q6NUQ1 792 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 SLC27A1Q6PCB7 646 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 C1orf186Q6ZWK4 172 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 CABP7Q86V35 215 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 TMEM173Q86WV6 379 aaPredicted RBP16■□□□□ 0.15
PDAP1-204ENST00000496335 DAW1Q8N136 415 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 CNNM3Q8NE01 707 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 GADD45GIP1Q8TAE8 222 aaPredicted RBP16■□□□□ 0.15
PDAP1-204ENST00000496335 DEPTORQ8TB45 409 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 URGCPQ8TCY9 931 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 KIFAP3Q92845 792 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 IFT74Q96LB3 600 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 UHRF1Q96T88 793 aaPredicted RBP16■□□□□ 0.15
PDAP1-204ENST00000496335 TRIM6Q9C030 488 aaPredicted RBP16■□□□□ 0.15
PDAP1-204ENST00000496335 CCDC113Q9H0I3 377 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 C2orf40Q9H1Z8 148 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 NXF3Q9H4D5 531 aaKnown RBP16■□□□□ 0.15
PDAP1-204ENST00000496335 PRMT7Q9NVM4 692 aaPredicted RBP16■□□□□ 0.15
PDAP1-204ENST00000496335 DNAJB4Q9UDY4 337 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 PUF60Q9UHX1 559 aaKnown RBP16■□□□□ 0.15
PDAP1-204ENST00000496335 MTMR6Q9Y217 621 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 LZTS1Q9Y250 596 aa16■□□□□ 0.15
PDAP1-204ENST00000496335 TDRD15B5MCY1 1934 aaKnown RBP16■□□□□ 0.15
PDAP1-204ENST00000496335 MUC3AQ02505 3323 aa15.99■□□□□ 0.15
PDAP1-204ENST00000496335 FSCN2O14926 492 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms