RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 MYOCDQ8IZQ8 938 aa10.65□□□□□ -0.7
PRPF3-207ENST00000496202 FMR1NBQ8N0W7 255 aaPredicted RBP10.65□□□□□ -0.7
PRPF3-207ENST00000496202 DNAJC19Q96DA6 116 aa10.65□□□□□ -0.7
PRPF3-207ENST00000496202 VWCEQ96DN2 955 aa10.65□□□□□ -0.7
PRPF3-207ENST00000496202 BICD1Q96G01 975 aa10.65□□□□□ -0.7
PRPF3-207ENST00000496202 PAGE5Q96GU1 130 aa10.65□□□□□ -0.7
PRPF3-207ENST00000496202 PRIMPOLQ96LW4 560 aa10.65□□□□□ -0.7
PRPF3-207ENST00000496202 ADAM2Q99965 735 aa10.65□□□□□ -0.7
PRPF3-207ENST00000496202 C7orf25Q9BPX7 421 aa10.65□□□□□ -0.7
PRPF3-207ENST00000496202 TRIM9Q9C026 710 aa10.65□□□□□ -0.7
PRPF3-207ENST00000496202 TSPYL2Q9H2G4 693 aaPredicted RBP10.65□□□□□ -0.7
PRPF3-207ENST00000496202 BLZF1Q9H2G9 400 aa10.65□□□□□ -0.7
PRPF3-207ENST00000496202 C1orf112Q9NSG2 853 aa10.65□□□□□ -0.7
PRPF3-207ENST00000496202 EXOC1Q9NV70 894 aa10.65□□□□□ -0.7
PRPF3-207ENST00000496202 WDR70Q9NW82 654 aa10.65□□□□□ -0.7
PRPF3-207ENST00000496202 COLQQ9Y215 455 aaPredicted RBP10.65□□□□□ -0.7
PRPF3-207ENST00000496202 ADGRA3Q8IWK6 1321 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 TRAK2O60296 914 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 TSPAN1O60635 241 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 MYL1P05976 194 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 ATP2A2P16615 1042 aaKnown RBP10.64□□□□□ -0.71
PRPF3-207ENST00000496202 AXLP30530 894 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 COASYQ13057 564 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 CNNM4Q6P4Q7 775 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 NOTUMQ6P988 496 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 STXBP4Q6ZWJ1 553 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 HAUS6Q7Z4H7 955 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 CCDC51Q96ER9 411 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 SLC9A7Q96T83 725 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 ADPGKQ9BRR6 497 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 ZBED2Q9BTP6 218 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 TMX1Q9H3N1 280 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 TMEM134Q9H6X4 195 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 MRPL44Q9H9J2 332 aaKnown RBP10.64□□□□□ -0.71
PRPF3-207ENST00000496202 CHST12Q9NRB3 414 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 AGPAT5Q9NUQ2 364 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 CXXC1Q9P0U4 656 aaPredicted RBP10.64□□□□□ -0.71
PRPF3-207ENST00000496202 ARHGAP28Q9P2N2 729 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 LRFN2Q9ULH4 789 aa10.64□□□□□ -0.71
PRPF3-207ENST00000496202 CNTNAP2Q9UHC6 1331 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 RANBP2P49792 3224 aaKnown RBP10.63□□□□□ -0.71
PRPF3-207ENST00000496202 ACKR2O00590 384 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 ENPP3O14638 875 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 N4BP3O15049 544 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 MGEA5O60502 916 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 NR1I2O75469 434 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 UPP2O95045 317 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 SMC2O95347 1197 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 GCNT3O95395 438 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 STAG3L1P0CL83 205 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 SKIP12755 728 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 CASP1P29466 404 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 NMT1P30419 496 aaKnown RBP10.63□□□□□ -0.71
PRPF3-207ENST00000496202 MATR3P43243 847 aaKnown RBP eCLIP10.63□□□□□ -0.71
PRPF3-207ENST00000496202 SARSP49591 514 aaKnown RBP10.63□□□□□ -0.71
PRPF3-207ENST00000496202 RAB27AP51159 221 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 NCKAP1LP55160 1127 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 DEFB103AP81534 67 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 CUL4BQ13620 913 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 ALCAMQ13740 583 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 DSC3Q14574 896 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 FAM187BQ17R55 369 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 RASIP1Q5U651 963 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 FAM117BQ6P1L5 589 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.63□□□□□ -0.71
PRPF3-207ENST00000496202 UNC13DQ70J99 1090 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 SLC24A5Q71RS6 500 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 NPAS4Q8IUM7 802 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 RNF169Q8NCN4 708 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 TMEM161BQ8NDZ6 487 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 PHOSPHO2Q8TCD6 241 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 CPB2Q96IY4 423 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 MRPL4Q9BYD3 311 aaKnown RBP10.63□□□□□ -0.71
PRPF3-207ENST00000496202 TRIM6Q9C030 488 aaPredicted RBP10.63□□□□□ -0.71
PRPF3-207ENST00000496202 CCDC113Q9H0I3 377 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 PRO3102Q9H379 93 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 FZD8Q9H461 694 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 OLFML3Q9NRN5 406 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 RGS18Q9NS28 235 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 TBC1D7Q9P0N9 293 aa10.63□□□□□ -0.71
PRPF3-207ENST00000496202 PTPRSQ13332 1948 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.62□□□□□ -0.71
PRPF3-207ENST00000496202 PVALEFA0A1B0GWK0 134 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 FRMD3A2A2Y4 597 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 RBAK-RBAKDNI3L0D1 243 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 B4GALT5O43286 388 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 MAPTP10636 758 aaKnown RBP10.62□□□□□ -0.71
PRPF3-207ENST00000496202 ARF4P18085 180 aaPredicted RBP10.62□□□□□ -0.71
PRPF3-207ENST00000496202 C1QBPQ07021 282 aaKnown RBP10.62□□□□□ -0.71
PRPF3-207ENST00000496202 POSTNQ15063 836 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 AMHR2Q16671 573 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 FAM26FQ5R3K3 315 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 ATF7IP2Q5U623 682 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 HERC6Q8IVU3 1022 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 HACE1Q8IYU2 909 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 ENGASEQ8NFI3 743 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 LINC01599Q8WXQ3 324 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 HVCN1Q96D96 273 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 TIGD1Q96MW7 591 aa10.62□□□□□ -0.71
PRPF3-207ENST00000496202 NTPCRQ9BSD7 190 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms