RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 RNF10Q8N5U6 811 aaKnown RBP7.54□□□□□ -1.2
USP39-219ENST00000496047 GPR161Q8N6U8 529 aaKnown RBP7.54□□□□□ -1.2
USP39-219ENST00000496047 XXYLT1Q8NBI6 393 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 SMC1BQ8NDV3 1235 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 RABGGTAQ92696 567 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 BICD1Q96G01 975 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 FAM167AQ96KS9 214 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 CALR3Q96L12 384 aaKnown RBP7.54□□□□□ -1.2
USP39-219ENST00000496047 NOX5Q96PH1 765 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 JPH2Q9BR39 696 aaPredicted RBP7.54□□□□□ -1.2
USP39-219ENST00000496047 FGFBP2Q9BYJ0 223 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 KMT5AQ9NQR1 393 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 ZNF302Q9NR11 478 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.54□□□□□ -1.2
USP39-219ENST00000496047 GABBR1Q9UBS5 961 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 TSR3Q9UJK0 312 aaKnown RBP7.54□□□□□ -1.2
USP39-219ENST00000496047 AGTPBP1Q9UPW5 1226 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 PCDHA13Q9Y5I0 950 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 ZMYM2Q9UBW7 1377 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 ZNF236Q9UL36 1845 aa7.54□□□□□ -1.2
USP39-219ENST00000496047 MGAMO43451 1857 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 A0A0G2JLL6 359 aaPredicted RBP7.53□□□□□ -1.2
USP39-219ENST00000496047 SPDYE5A6NIY4 337 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 SFI1A8K8P3 1242 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 ADM5C9JUS6 153 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 GAS2O43903 313 aaKnown RBP7.53□□□□□ -1.2
USP39-219ENST00000496047 TADA3O75528 432 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 AKAP3O75969 853 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 LCA5LO95447 670 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 SUPT20HL2P0C7V6 817 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 TGFB3P10600 412 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 KCNA2P16389 499 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 TCP1P17987 556 aaKnown RBP7.53□□□□□ -1.2
USP39-219ENST00000496047 ERCC3P19447 782 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 EPHX2P34913 555 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 RFC5P40937 340 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 PAFAH1B1P43034 410 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 FMO5P49326 533 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 HIRAP54198 1017 aaPredicted RBP7.53□□□□□ -1.2
USP39-219ENST00000496047 PEX3P56589 373 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 RTP1P59025 263 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 HERVK_113P62684 666 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 CCNA1P78396 465 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 GTF2BQ00403 316 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 ENPEPQ07075 957 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 KCNMA1Q12791 1236 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 STRN3Q13033 797 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 GPS2Q13227 327 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 KCTD2Q14681 263 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 SLC18A3Q16572 532 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 MAP9Q49MG5 647 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.53□□□□□ -1.2
USP39-219ENST00000496047 MAEAQ7L5Y9 396 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 HAUS6Q7Z4H7 955 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 PRRT2Q7Z6L0 340 aaPredicted RBP7.53□□□□□ -1.2
USP39-219ENST00000496047 PNMA8AQ86V59 439 aaPredicted RBP7.53□□□□□ -1.2
USP39-219ENST00000496047 TMEM174Q8WUU8 243 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 LMBR1Q8WVP7 490 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 BAP1Q92560 729 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 CDCA5Q96FF9 252 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 WDR24Q96S15 920 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 CRACR2AQ9BSW2 395 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 PAGR1Q9BTK6 254 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 SPATC1LQ9H0A9 340 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 GANQ9H2C0 597 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 ACBD3Q9H3P7 528 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 AZI2Q9H6S1 392 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 ELP3Q9H9T3 547 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 KIAA1586Q9HCI6 787 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 NRBP2Q9NSY0 501 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 AIPL1Q9NZN9 384 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 JRKLQ9Y4A0 524 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 HYOU1Q9Y4L1 999 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 SAR1BQ9Y6B6 198 aa7.53□□□□□ -1.2
USP39-219ENST00000496047 PDCD11Q14690 1871 aaKnown RBP7.52□□□□□ -1.21
USP39-219ENST00000496047 MACROD2A1Z1Q3 448 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 SPATA31C2B4DYI2 1134 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 RBAK-RBAKDNI3L0D1 243 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 SPTLC1O15269 473 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 PJA2O43164 708 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 TGFB1I1O43294 461 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 LDHAP00338 332 aaKnown RBP7.52□□□□□ -1.21
USP39-219ENST00000496047 UCHL3P15374 230 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 PON1P27169 355 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 ARHGAP25P42331 645 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 MXI1P50539 228 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 VAMP7P51809 220 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 ACTR2P61160 394 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 PRKCEQ02156 737 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 SP4Q02446 784 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 MAPK7Q13164 816 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 SNAPC2Q13487 334 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 BMS1Q14692 1282 aaKnown RBP7.52□□□□□ -1.21
USP39-219ENST00000496047 TMEM259Q4ZIN3 620 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 ZC2HC1CQ53FD0 456 aaPredicted RBP7.52□□□□□ -1.21
USP39-219ENST00000496047 KLHDC7AQ5VTJ3 777 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 MAP4K3Q8IVH8 894 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 FAM133AQ8N9E0 248 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 DEPTORQ8TB45 409 aa7.52□□□□□ -1.21
USP39-219ENST00000496047 TCP11Q8WWU5 503 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms