RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SSBP05455 408 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 ADH1AP07327 375 aa10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 CNPP09543 421 aaKnown RBP10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 NCLP19338 710 aaKnown RBP10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 CD72P21854 359 aa10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 MTAPQ13126 283 aa10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 DSC3Q14574 896 aa10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 CCDC178Q5BJE1 867 aa10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 VPS53Q5VIR6 699 aa10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 PSAPL1Q6NUJ1 521 aa10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 IQCA1Q86XH1 822 aa10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 HOMER1Q86YM7 354 aa10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 ST13P5Q8NFI4 369 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 ESR2Q92731 530 aa10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 CLDN23Q96B33 292 aa10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 FAM217BQ9NTX9 383 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 MRPS17Q9Y2R5 130 aaKnown RBP10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 ZFP37Q9Y6Q3 630 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 LAMA4Q16363 1823 aa10.98□□□□□ -0.65
SMARCAL1-213ENST00000496037 DMXL2Q8TDJ6 3036 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 GLUD1P00367 558 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 KCNA2P16389 499 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 TARSP26639 723 aaKnown RBP10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 CLCN1P35523 988 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 CRYBB1P53674 252 aaPredicted RBP10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 HAND2P61296 217 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 KIZQ2M2Z5 673 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 PCNX4Q63HM2 1172 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 TPRG1Q6ZUI0 275 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 MTSS1LQ765P7 747 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 SIRT2Q8IXJ6 389 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 RSPH1Q8WYR4 309 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 MAP4K1Q92918 833 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 GPRASP2Q96D09 838 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 RNF41Q9H4P4 317 aaPredicted RBP10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 MRPL17Q9NRX2 175 aaKnown RBP10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 PKD2L1Q9P0L9 805 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 ANKFY1Q9P2R3 1169 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 COL4A3Q01955 1670 aa10.97□□□□□ -0.65
SMARCAL1-213ENST00000496037 BPTFQ12830 3046 aa10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 ITPR1Q14643 2758 aa10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 EIF4E1BA6NMX2 242 aaKnown RBP10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 TM4SF5O14894 197 aa10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 ATP9AO75110 1047 aa10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 RFPL2O75678 378 aa10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 OATP04181 439 aa10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 KLRC1P26715 233 aa10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 ALX1Q15699 326 aa10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 STPG1Q5TH74 334 aa10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 ZNF852Q6ZMS4 543 aa10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 FGF14Q92915 247 aa10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 RPP25Q9BUL9 199 aaKnown RBP10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 JPH1Q9HDC5 661 aaPredicted RBP10.96□□□□□ -0.65
SMARCAL1-213ENST00000496037 RNF40O75150 1001 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 URODP06132 367 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 MYBP10242 640 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 TDGF1P13385 188 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 SPINK2P20155 84 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 NOVA1P51513 510 aaKnown RBP10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 CCR3P51677 355 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 STAT5BP51692 787 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 AK2P54819 239 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 RNASELQ05823 741 aaKnown RBP10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 ADCY1Q08828 1119 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 ZNF252P-AS1Q0IIN9 211 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 SOWAHCQ53LP3 525 aaPredicted RBP10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 PARM1Q6UWI2 310 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 KIAA0319LQ8IZA0 1049 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 SMARCC2Q8TAQ2 1214 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 BCL7CQ8WUZ0 217 aaPredicted RBP10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 CUL5Q93034 780 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 MTMR8Q96EF0 704 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 PCYT2Q99447 389 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 IER2Q9BTL4 223 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 LSM14BQ9BX40 385 aaKnown RBP10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 LAMA5O15230 3695 aa10.95□□□□□ -0.66
SMARCAL1-213ENST00000496037 A0A0U1RQF3 1178 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 KLRF2D3W0D1 207 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 C2CD2LO14523 706 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 FGAP02671 866 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 GALTP07902 379 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 FSHRP23945 695 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 CNR2P34972 360 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 NT5C2P49902 561 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 MTMR1Q13613 665 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 SF3A2Q15428 464 aaKnown RBP10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 SWT1Q5T5J6 900 aaKnown RBP10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 B4GALNT3Q6L9W6 998 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 CEP68Q76N32 757 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 PLPPR4Q7Z2D5 763 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 PANK1Q8TE04 598 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 GATA6Q92908 595 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 ZNF707Q96C28 371 aaPredicted RBP10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 SPATA32Q96LK8 384 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 DRC1Q96MC2 740 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 CHRDQ9H2X0 955 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 ZDHHC7Q9NXF8 308 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 SSX2IPQ9Y2D8 614 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 FREM2Q5SZK8 3169 aa10.94□□□□□ -0.66
SMARCAL1-213ENST00000496037 NEDD4P46934 1319 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms