RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 CNTNAP2Q9UHC6 1331 aa20.53■□□□□ 0.88
CLCNKA-207ENST00000495784 CTSAP10619 480 aa20.52■□□□□ 0.88
CLCNKA-207ENST00000495784 HOXA11P31270 313 aaPredicted RBP20.52■□□□□ 0.88
CLCNKA-207ENST00000495784 TXKP42681 527 aa20.52■□□□□ 0.88
CLCNKA-207ENST00000495784 GIT2Q14161 759 aa20.52■□□□□ 0.88
CLCNKA-207ENST00000495784 TFDP1Q14186 410 aa20.52■□□□□ 0.88
CLCNKA-207ENST00000495784 MXD4Q14582 209 aaPredicted RBP20.52■□□□□ 0.88
CLCNKA-207ENST00000495784 AGMOQ6ZNB7 445 aa20.52■□□□□ 0.88
CLCNKA-207ENST00000495784 MRPL10Q7Z7H8 261 aaKnown RBP20.52■□□□□ 0.88
CLCNKA-207ENST00000495784 AUTS2Q8WXX7 1259 aa20.52■□□□□ 0.88
CLCNKA-207ENST00000495784 FAM193BQ96PV7 902 aaPredicted RBP20.52■□□□□ 0.88
CLCNKA-207ENST00000495784 RSAD1Q9HA92 442 aa20.52■□□□□ 0.88
CLCNKA-207ENST00000495784 DNAJB4Q9UDY4 337 aa20.52■□□□□ 0.88
CLCNKA-207ENST00000495784 MUC6Q6W4X9 2439 aa20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 LYPLA2O95372 231 aa20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 HOXD11P31277 338 aaPredicted RBP20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 SLC11A1P49279 550 aa20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 ZXDAP98168 799 aa20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 NCBP1Q09161 790 aaKnown RBP20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 UBXN11Q5T124 520 aa20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 TRIM67Q6ZTA4 783 aa20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 ZNF280BQ86YH2 543 aa20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 CNNM3Q8NE01 707 aa20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 BCL7CQ8WUZ0 217 aaPredicted RBP20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 HSD17B14Q9BPX1 270 aa20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 XPNPEP1Q9NQW7 623 aa20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 TSHZ2Q9NRE2 1034 aa20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 ANKEF1Q9NU02 776 aa20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 KANSL3Q9P2N6 904 aa20.51■□□□□ 0.87
CLCNKA-207ENST00000495784 TMEM221A6NGB7 291 aa20.5■□□□□ 0.87
CLCNKA-207ENST00000495784 M0R296 226 aa20.5■□□□□ 0.87
CLCNKA-207ENST00000495784 DGAT1O75907 488 aa20.5■□□□□ 0.87
CLCNKA-207ENST00000495784 SP100P23497 879 aaPredicted RBP20.5■□□□□ 0.87
CLCNKA-207ENST00000495784 PTENP60484 403 aa20.5■□□□□ 0.87
CLCNKA-207ENST00000495784 ITIH3Q06033 890 aa20.5■□□□□ 0.87
CLCNKA-207ENST00000495784 PCBP1Q15365 356 aaKnown RBP eCLIP20.5■□□□□ 0.87
CLCNKA-207ENST00000495784 SAFBQ15424 915 aaKnown RBP eCLIP20.5■□□□□ 0.87
CLCNKA-207ENST00000495784 NECTIN4Q96NY8 510 aa20.5■□□□□ 0.87
CLCNKA-207ENST00000495784 KCNH6Q9H252 994 aa20.5■□□□□ 0.87
CLCNKA-207ENST00000495784 ADAM7Q9H2U9 754 aa20.5■□□□□ 0.87
CLCNKA-207ENST00000495784 IRAK3Q9Y616 596 aa20.5■□□□□ 0.87
CLCNKA-207ENST00000495784 INO80B-WBP1J3KQ70 363 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 TSPAN1O60635 241 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 POMCP01189 267 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 ALDH2P05091 517 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 ITGA4P13612 1032 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 NCLP19338 710 aaKnown RBP20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 AXLP30530 894 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 AFF1P51825 1210 aaKnown RBP20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 NOTUMQ6P988 496 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 ZBTB33Q86T24 672 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 PBXIP1Q96AQ6 731 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 CCDC51Q96ER9 411 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 MTMR9Q96QG7 549 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 TMEM175Q9BSA9 504 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 UBN1Q9NPG3 1134 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 DZANK1Q9NVP4 752 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 STK39Q9UEW8 545 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 NR2E1Q9Y466 385 aa20.49■□□□□ 0.87
CLCNKA-207ENST00000495784 WNT7AO00755 349 aa20.48■□□□□ 0.87
CLCNKA-207ENST00000495784 B4GALT3O60512 393 aa20.48■□□□□ 0.87
CLCNKA-207ENST00000495784 DDHD2O94830 711 aa20.48■□□□□ 0.87
CLCNKA-207ENST00000495784 ATP2B1P20020 1258 aa20.48■□□□□ 0.87
CLCNKA-207ENST00000495784 RARS2Q5T160 578 aaKnown RBP20.48■□□□□ 0.87
CLCNKA-207ENST00000495784 BMP8AQ7Z5Y6 402 aa20.48■□□□□ 0.87
CLCNKA-207ENST00000495784 RIPOR3Q96MK2 946 aa20.48■□□□□ 0.87
CLCNKA-207ENST00000495784 CDH22Q9UJ99 828 aa20.48■□□□□ 0.87
CLCNKA-207ENST00000495784 FAN1Q9Y2M0 1017 aa20.48■□□□□ 0.87
CLCNKA-207ENST00000495784 IPPQ9Y573 584 aa20.48■□□□□ 0.87
CLCNKA-207ENST00000495784 TECTAO75443 2155 aa20.48■□□□□ 0.87
CLCNKA-207ENST00000495784 EPCAMP16422 314 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 MCM7P33993 719 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 ARL2P36404 184 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 MTHFRP42898 656 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 RARRES1P49788 294 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 GUCY1B3Q02153 619 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 POU5F1BQ06416 359 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 CAPSQ13938 189 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 PTPN14Q15678 1187 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 PTPN21Q16825 1174 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 PPFIBP1Q86W92 1011 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 IFNLR1Q8IU57 520 aaPredicted RBP20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 C12orf76Q8N812 135 aaPredicted RBP20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 SMG8Q8ND04 991 aaKnown RBP20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 ASAP3Q8TDY4 903 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 PIGOQ8TEQ8 1089 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 CPB2Q96IY4 423 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 FBXL18Q96ME1 805 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 VN1R3Q9BXE9 311 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 EMILIN2Q9BXX0 1053 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 EIF2AQ9BY44 585 aaKnown RBP20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 TRIM6Q9C030 488 aaPredicted RBP20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 POMKQ9H5K3 350 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 ARID2Q68CP9 1835 aa20.47■□□□□ 0.87
CLCNKA-207ENST00000495784 POTEMA6NI47 508 aa20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 SSBP05455 408 aaKnown RBP eCLIP20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 XRCC6P12956 609 aaKnown RBP eCLIP20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 MBTD1Q05BQ5 628 aa20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 SIGLEC14Q08ET2 396 aa20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 ST3GAL1Q11201 340 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms