RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 HOXA2O43364 376 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 TRAK2O60296 914 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 IDEP14735 1019 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 SCP2P22307 547 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 ABCD1P33897 745 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 RAB27AP51159 221 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 E2F4Q16254 413 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 FAM187BQ17R55 369 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 ZNF697Q5TEC3 545 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 PPP2R2DQ66LE6 453 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 GPR153Q6NV75 609 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 FAM178BQ8IXR5 827 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 HACE1Q8IYU2 909 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 ABI1Q8IZP0 508 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 SLC17A8Q8NDX2 589 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 STAMQ92783 540 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 PGBD4Q96DM1 585 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 CPB2Q96IY4 423 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 ADPGKQ9BRR6 497 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 NTPCRQ9BSD7 190 aaKnown RBP13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 NKX2-4Q9H2Z4 354 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 FZD8Q9H461 694 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 TMEM134Q9H6X4 195 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 ELAC1Q9H777 363 aaKnown RBP13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 KBTBD4Q9NVX7 518 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 TMEM161AQ9NX61 479 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 GBF1Q92538 1859 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 TTC3P53804 2025 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 K7ENM7 598 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 N4BP3O15049 544 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 EOMESO95936 686 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 CA3P07451 260 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 SLFN14P0C7P3 912 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 MYOGP15173 224 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 GAP43P17677 238 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 ARF4P18085 180 aaPredicted RBP13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 HOXA11P31270 313 aaPredicted RBP13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 FXR1P51114 621 aaKnown RBP eCLIP13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 NDUFA8P51970 172 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 ZNF131P52739 623 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 FAM189BP81408 668 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 AMHR2Q16671 573 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 SLC27A1Q6PCB7 646 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 APBB1IPQ7Z5R6 666 aaPredicted RBP13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 ECHDC2Q86YB7 292 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 CCDC65Q8IXS2 484 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 CNNM3Q8NE01 707 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 TRAIPQ9BWF2 469 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 CCDC113Q9H0I3 377 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 FAM105AQ9NUU6 356 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 PANK4Q9NVE7 773 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 ARHGAP28Q9P2N2 729 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 SEL1LQ9UBV2 794 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 SERTAD1Q9UHV2 236 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 ADGRA3Q8IWK6 1321 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 CNTNAP2Q9UHC6 1331 aa13.3□□□□□ -0.28
CSNK1E-213ENST00000495232 TMEM265A0A087WTH1 108 aa13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 B4GALT5O43286 388 aa13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 DGKIO75912 1065 aa13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 AFMP43652 599 aa13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 NCKAP1LP55160 1127 aa13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 ASIC1P78348 528 aa13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 HTRA4P83105 476 aaPredicted RBP13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 BTG3Q14201 252 aaPredicted RBP13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 HERC4Q5GLZ8 1057 aaPredicted RBP13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 HAUS6Q7Z4H7 955 aa13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 FIBCD1Q8N539 461 aa13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 TMEM161BQ8NDZ6 487 aa13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 DNAJC19Q96DA6 116 aa13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 BICD1Q96G01 975 aa13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 MRPL4Q9BYD3 311 aaKnown RBP13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 MRPL44Q9H9J2 332 aaKnown RBP13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 HPSEQ9Y251 543 aa13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 YBX2Q9Y2T7 364 aaKnown RBP13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 PCDHB2Q9Y5E7 798 aa13.29□□□□□ -0.28
CSNK1E-213ENST00000495232 A0A1B0GUA9 196 aa13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 ZNF623O75123 536 aa13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 MAPTP10636 758 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 LONRF3Q496Y0 759 aa13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 PAN2Q504Q3 1202 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 SPOUT1Q5T280 376 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 ATF7IP2Q5U623 682 aa13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 CDR2LQ86X02 465 aaPredicted RBP13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 SFR1Q86XK3 245 aa13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 CMTR2Q8IYT2 770 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 C7orf25Q9BPX7 421 aa13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 TCHPQ9BT92 498 aa13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 TRIM9Q9C026 710 aa13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 ZNF576Q9H609 170 aa13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 UBN1Q9NPG3 1134 aa13.28□□□□□ -0.28
CSNK1E-213ENST00000495232 SZT2Q5T011 3432 aa13.27□□□□□ -0.28
CSNK1E-213ENST00000495232 FAM237AA0A1B0GTK4 181 aa13.27□□□□□ -0.29
CSNK1E-213ENST00000495232 LCHNA4D1U4 455 aa13.27□□□□□ -0.29
CSNK1E-213ENST00000495232 TBKBP1A7MCY6 615 aa13.27□□□□□ -0.29
CSNK1E-213ENST00000495232 ACTN4O43707 911 aaKnown RBP13.27□□□□□ -0.29
CSNK1E-213ENST00000495232 ZNF202O95125 648 aa13.27□□□□□ -0.29
CSNK1E-213ENST00000495232 GCNT3O95395 438 aa13.27□□□□□ -0.29
CSNK1E-213ENST00000495232 NPTXRO95502 500 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms