RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 SIM1P81133 766 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-219ENST00000495172 PFKPQ01813 784 aa10.24□□□□□ -0.77
GARNL3-219ENST00000495172 PPP2R5DQ14738 602 aa10.24□□□□□ -0.77
GARNL3-219ENST00000495172 DAB2IPQ5VWQ8 1189 aa10.24□□□□□ -0.77
GARNL3-219ENST00000495172 ZSCAN25Q6NSZ9 544 aa10.24□□□□□ -0.77
GARNL3-219ENST00000495172 ZNF598Q86UK7 904 aaKnown RBP10.24□□□□□ -0.77
GARNL3-219ENST00000495172 ERC1Q8IUD2 1116 aa10.24□□□□□ -0.77
GARNL3-219ENST00000495172 PRKD2Q9BZL6 878 aa10.24□□□□□ -0.77
GARNL3-219ENST00000495172 HCFC1R1Q9NWW0 138 aa10.24□□□□□ -0.77
GARNL3-219ENST00000495172 ATG2BQ96BY7 2078 aa10.24□□□□□ -0.77
GARNL3-219ENST00000495172 BAZ2BQ9UIF8 2168 aaKnown RBP10.24□□□□□ -0.77
GARNL3-219ENST00000495172 WDR81Q562E7 1941 aa10.23□□□□□ -0.77
GARNL3-219ENST00000495172 RRN3P2A6NIE6 340 aa10.23□□□□□ -0.77
GARNL3-219ENST00000495172 DCLK1O15075 740 aa10.23□□□□□ -0.77
GARNL3-219ENST00000495172 RNF113AO15541 343 aaKnown RBP10.23□□□□□ -0.77
GARNL3-219ENST00000495172 HOXA2O43364 376 aa10.23□□□□□ -0.77
GARNL3-219ENST00000495172 FIBPO43427 364 aa10.23□□□□□ -0.77
GARNL3-219ENST00000495172 CSDE1O75534 798 aaKnown RBP10.23□□□□□ -0.77
GARNL3-219ENST00000495172 RPL17P18621 184 aaKnown RBP10.23□□□□□ -0.77
GARNL3-219ENST00000495172 KLRC1P26715 233 aa10.23□□□□□ -0.77
GARNL3-219ENST00000495172 PPP4R3BQ5MIZ7 849 aa10.23□□□□□ -0.77
GARNL3-219ENST00000495172 MARCH9Q86YJ5 346 aa10.23□□□□□ -0.77
GARNL3-219ENST00000495172 ARHGAP45Q92619 1136 aa10.23□□□□□ -0.77
GARNL3-219ENST00000495172 VPS45Q9NRW7 570 aa10.23□□□□□ -0.77
GARNL3-219ENST00000495172 MRPL17Q9NRX2 175 aaKnown RBP10.23□□□□□ -0.77
GARNL3-219ENST00000495172 TBC1D13Q9NVG8 400 aa10.23□□□□□ -0.77
GARNL3-219ENST00000495172 MRPS17Q9Y2R5 130 aaKnown RBP10.23□□□□□ -0.77
GARNL3-219ENST00000495172 NUP205Q92621 2012 aa10.23□□□□□ -0.77
GARNL3-219ENST00000495172 CCL16O15467 120 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 TGM5O43548 720 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 RPP40O75818 363 aaKnown RBP10.22□□□□□ -0.77
GARNL3-219ENST00000495172 DDHD2O94830 711 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 KCNA2P16389 499 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 CSRP1P21291 193 aaKnown RBP10.22□□□□□ -0.77
GARNL3-219ENST00000495172 CNR2P34972 360 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 CREB5Q02930 508 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 GNPTABQ3T906 1256 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 VPS53Q5VIR6 699 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 TANGO2Q6ICL3 276 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 PKN3Q6P5Z2 889 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 MAMSTRQ6ZN01 415 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 PLEKHM2Q8IWE5 1019 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 SEPT1Q8WYJ6 367 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 FAM3CQ92520 227 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 MCRS1Q96EZ8 462 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 RPS6KC1Q96S38 1066 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 SMARCAD1Q9H4L7 1026 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 CLMPQ9H6B4 373 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 CCDC86Q9H6F5 360 aaKnown RBP10.22□□□□□ -0.77
GARNL3-219ENST00000495172 POLIQ9UNA4 740 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 ABCA7Q8IZY2 2146 aa10.22□□□□□ -0.77
GARNL3-219ENST00000495172 UTP20O75691 2785 aaKnown RBP10.21□□□□□ -0.77
GARNL3-219ENST00000495172 PDCD11Q14690 1871 aaKnown RBP10.21□□□□□ -0.77
GARNL3-219ENST00000495172 DOPEY2Q9Y3R5 2298 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 GAS2O43903 313 aaKnown RBP10.21□□□□□ -0.77
GARNL3-219ENST00000495172 EXTL3O43909 919 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 GPR32O75388 356 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 GNAT2P19087 354 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 CCNE1P24864 410 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 SOX9P48436 509 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 CLCN6P51797 869 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 GHRHRQ02643 423 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 GSE1Q14687 1217 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 MTSS1LQ765P7 747 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 CACNA2D4Q7Z3S7 1137 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 WDR5BQ86VZ2 330 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 NPAS3Q8IXF0 933 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 STAG2Q8N3U4 1231 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 SPEM1Q8N4L4 309 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 GAB3Q8WWW8 586 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 PHF12Q96QT6 1004 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 UBL7Q96S82 380 aaPredicted RBP10.21□□□□□ -0.77
GARNL3-219ENST00000495172 RHOBTB2Q9BYZ6 727 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 NACAP1Q9BZK3 213 aa10.21□□□□□ -0.77
GARNL3-219ENST00000495172 SMARCA5O60264 1052 aaPredicted RBP10.2□□□□□ -0.78
GARNL3-219ENST00000495172 CAVIN2O95810 425 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 ADH1AP07327 375 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 CCDC192P0DO97 292 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 KRT10P13645 584 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 CRYBB1P53674 252 aaPredicted RBP10.2□□□□□ -0.78
GARNL3-219ENST00000495172 RNASELQ05823 741 aaKnown RBP10.2□□□□□ -0.78
GARNL3-219ENST00000495172 SLC35G1Q2M3R5 365 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 CYP26C1Q6V0L0 522 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 TRMT1LQ7Z2T5 733 aaKnown RBP10.2□□□□□ -0.78
GARNL3-219ENST00000495172 NME8Q8N427 588 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 PNPLA1Q8N8W4 532 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 KBTBD3Q8NAB2 608 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 PIP4K2CQ8TBX8 421 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 LOXL4Q96JB6 756 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 TMEM9BQ9NQ34 198 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 MARCH5Q9NX47 278 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 PTPRQQ9UMZ3 2332 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 INVSQ9Y283 1065 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 PRG3Q9Y2Y8 225 aaPredicted RBP10.2□□□□□ -0.78
GARNL3-219ENST00000495172 PIAS3Q9Y6X2 628 aa10.2□□□□□ -0.78
GARNL3-219ENST00000495172 NOTCH2Q04721 2471 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 NCANO14594 1321 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 GCOM1H8Y6P7 765 aaPredicted RBP10.19□□□□□ -0.78
GARNL3-219ENST00000495172 ORC4O43929 436 aa10.19□□□□□ -0.78
GARNL3-219ENST00000495172 URODP06132 367 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms