RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 PITRM1Q5JRX3 1037 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 CMIPQ8IY22 773 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 CMTM4Q8IZR5 234 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 BCL6BQ8N143 479 aaPredicted RBP3.16□□□□□ -1.9
LMNB1-207ENST00000494185 D2HGDHQ8N465 521 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 ANKRD53Q8N9V6 530 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 GLB1L3Q8NCI6 653 aaPredicted RBP3.16□□□□□ -1.9
LMNB1-207ENST00000494185 TGFBRAP1Q8WUH2 860 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 FATE1Q969F0 183 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 MIEF2Q96C03 454 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 EAF2Q96CJ1 260 aaPredicted RBP3.16□□□□□ -1.9
LMNB1-207ENST00000494185 FAM193BQ96PV7 902 aaPredicted RBP3.16□□□□□ -1.9
LMNB1-207ENST00000494185 ORAI2Q96SN7 254 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 ADI1Q9BV57 179 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 PCGF6Q9BYE7 350 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 REXO4Q9GZR2 422 aaKnown RBP3.16□□□□□ -1.9
LMNB1-207ENST00000494185 HAPLN2Q9GZV7 340 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 QRSL1Q9H0R6 528 aaKnown RBP3.16□□□□□ -1.9
LMNB1-207ENST00000494185 KCTD10Q9H3F6 313 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 IL23AQ9NPF7 189 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 DNAJC28Q9NX36 388 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 DDX56Q9NY93 547 aaKnown RBP3.16□□□□□ -1.9
LMNB1-207ENST00000494185 EDARQ9UNE0 448 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 GIT1Q9Y2X7 761 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 SPEF1Q9Y4P9 236 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 NCANO14594 1321 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 SHTN1A0MZ66 631 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 CAPN14A8MX76 684 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 PATE3B3GLJ2 98 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 GABRDO14764 452 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 PRICKLE3O43900 615 aaPredicted RBP3.15□□□□□ -1.91
LMNB1-207ENST00000494185 DTNBO60941 627 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 RECQL4O94761 1208 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 ALDH1A2O94788 518 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 ENDOD1O94919 500 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 MT-CO1P00395 513 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 LPLP06858 475 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 PDGFRBP09619 1106 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 MYBL2P10244 700 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 CCND1P24385 295 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 ECHS1P30084 290 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 IARSP41252 1262 aaKnown RBP3.15□□□□□ -1.91
LMNB1-207ENST00000494185 GPR3P46089 330 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 PER3P56645 1201 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 MGAT5Q09328 741 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 EFEMP1Q12805 493 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 CNGB1Q14028 1251 aaPredicted RBP3.15□□□□□ -1.91
LMNB1-207ENST00000494185 TRIM25Q14258 630 aaKnown RBP3.15□□□□□ -1.91
LMNB1-207ENST00000494185 RNF151Q2KHN1 245 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 MUM1L1Q5H9M0 696 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 PPP4R3AQ6IN85 833 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 PGM2L1Q6PCE3 622 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 LARP4Q71RC2 724 aaKnown RBP eCLIP3.15□□□□□ -1.91
LMNB1-207ENST00000494185 NOL8Q76FK4 1167 aaKnown RBP3.15□□□□□ -1.91
LMNB1-207ENST00000494185 MIGA2Q7L4E1 593 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 CLEC14AQ86T13 490 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 SGMS1Q86VZ5 419 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 OR5M3Q8NGP4 307 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 ZNF480Q8WV37 535 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 EDAQ92838 391 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 NKD2Q969F2 451 aaPredicted RBP3.15□□□□□ -1.91
LMNB1-207ENST00000494185 ADOQ96SZ5 270 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 UHRF1Q96T88 793 aaPredicted RBP3.15□□□□□ -1.91
LMNB1-207ENST00000494185 SMAD5Q99717 465 aaKnown RBP3.15□□□□□ -1.91
LMNB1-207ENST00000494185 DPYSL5Q9BPU6 564 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 PLA2G12BQ9BX93 195 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 ACE2Q9BYF1 805 aaPredicted RBP3.15□□□□□ -1.91
LMNB1-207ENST00000494185 ASPSCR1Q9BZE9 553 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 CCDC8Q9H0W5 538 aaPredicted RBP3.15□□□□□ -1.91
LMNB1-207ENST00000494185 MEGF9Q9H1U4 602 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 CCM2LQ9NUG4 571 aaPredicted RBP3.15□□□□□ -1.91
LMNB1-207ENST00000494185 MKS1Q9NXB0 559 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 MOCS1Q9NZB8 636 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 PPP4R1LQ9P1A2 415 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 KLHL42Q9P2K6 505 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 PRSS50Q9UI38 385 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 TMPRSS11EQ9UL52 423 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 PTPN22Q9Y2R2 807 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 CDY2AQ9Y6F7 541 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 DUSP10Q9Y6W6 482 aa3.15□□□□□ -1.91
LMNB1-207ENST00000494185 A0A0A6YYK5 440 aaPredicted RBP3.14□□□□□ -1.91
LMNB1-207ENST00000494185 TRIM75PA6NK02 468 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 B5MCH6 92 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 SEC24DO94855 1032 aaPredicted RBP3.14□□□□□ -1.91
LMNB1-207ENST00000494185 SPATA31D3P0C874 917 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 VCAM1P19320 739 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 CRHR1P34998 444 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 ADCY7P51828 1080 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 SRSF2Q01130 221 aaKnown RBP3.14□□□□□ -1.91
LMNB1-207ENST00000494185 CLUL1Q15846 466 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 ABCB5Q2M3G0 1257 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 INAVAQ3KP66 663 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 PLEKHG6Q3KR16 790 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 DCAF17Q5H9S7 520 aaPredicted RBP3.14□□□□□ -1.91
LMNB1-207ENST00000494185 TOR2AQ5JU69 321 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 METTL24Q5JXM2 366 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 FKBP15Q5T1M5 1219 aa3.14□□□□□ -1.91
LMNB1-207ENST00000494185 MBNL2Q5VZF2 373 aaKnown RBP3.14□□□□□ -1.91
LMNB1-207ENST00000494185 FAM111BQ6SJ93 734 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms