RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CNOT8Q9UFF9 292 aaKnown RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 ARL2BPQ9Y2Y0 163 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 RNF103O00237 685 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 STRNO43815 780 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 PALMO75781 387 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 KCNA3P22001 575 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 CHRNA3P32297 505 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 GGCXP38435 758 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 ALDH18A1P54886 795 aaKnown RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 CTSWP56202 376 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 NDUFA5Q16718 116 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 TEX2Q8IWB9 1127 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 CNPY4Q8N129 248 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 DTX3LQ8TDB6 740 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 EME1Q96AY2 570 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 SNF8Q96H20 258 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 SLC13A1Q9BZW2 595 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 NDST4Q9H3R1 872 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 BATF3Q9NR55 127 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 BIRC5O15392 142 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 SOX6P35712 828 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 PDIA2Q13087 525 aaKnown RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 TRIM16LQ309B1 348 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 ACCSLQ4AC99 568 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 WLSQ5T9L3 541 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 POTEAQ6S8J7 498 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 P3H2Q8IVL5 708 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 MICU2Q8IYU8 434 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 SDR42E1Q8WUS8 393 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 RSPH1Q8WYR4 309 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 DNAJC7Q99615 494 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 ZBED2Q9BTP6 218 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 ZMYND8Q9ULU4 1186 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 STAP1Q9ULZ2 295 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 ADGRL1O94910 1474 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 SERPIND1P05546 499 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 HIST1H2AGP0C0S8 130 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 HIST1H2ADP20671 130 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 SERPINB3P29508 390 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 GPC5P78333 572 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 MTHFD1LQ6UB35 978 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 HIST1H2AHQ96KK5 128 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 EYA1Q99502 592 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 HIST1H2AJQ99878 128 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 H2AFJQ9BTM1 129 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 HEMGNQ9BXL5 484 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 KRCC1Q9NPI7 259 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 MBD2Q9UBB5 411 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 DTNAQ9Y4J8 743 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 GRID2IPA4D2P6 1211 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 TRIM13O60858 407 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 PLA2G4BP0C869 781 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 HOXC9P31274 260 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 RPS8P62241 208 aaKnown RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 PSMC6P62333 389 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 MAPRE1Q15691 268 aaKnown RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 USP39Q53GS9 565 aaKnown RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 EFHC2Q5JST6 749 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 CABLES1Q8TDN4 633 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 RNF26Q9BY78 433 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 FHDC1Q9C0D6 1143 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 POLR3EQ9NVU0 708 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 CACNA2D2Q9NY47 1150 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 UTP6Q9NYH9 597 aaKnown RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 UBE4BO95155 1302 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 TEX28O15482 410 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 DTNBO60941 627 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 TTLL1O95922 423 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 FYNP06241 537 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 ENO1P06733 434 aaKnown RBP8.31□□□□□ -1.08
BRCA1-221ENST00000493795 SCNN1DP51172 638 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 NLRP11P59045 1033 aaKnown RBP8.31□□□□□ -1.08
BRCA1-221ENST00000493795 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.31□□□□□ -1.08
BRCA1-221ENST00000493795 RASGRF1Q13972 1273 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 SPDYAQ5MJ70 313 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 ZBED8Q8IZ13 594 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 PPP1R16BQ96T49 567 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 KCNK16Q96T55 309 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 CCT7Q99832 543 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 FANCEQ9HB96 536 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 RIMS2Q9UQ26 1411 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 PDIA3P30101 505 aaKnown RBP8.31□□□□□ -1.08
BRCA1-221ENST00000493795 SDC4P31431 198 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 PRUNE1Q86TP1 453 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 OR6P1Q8NGX9 317 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 GPT2Q8TD30 523 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 AFG1LQ8WV93 481 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 RNPEPQ9H4A4 650 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 MLXIPLQ9NP71 852 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 MRGBPQ9NV56 204 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 IP6K2Q9UHH9 426 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 RGS12O14924 1447 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 CD109Q6YHK3 1445 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 AP3B1O00203 1094 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 HUS1O60921 280 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 KLHL18O94889 574 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 APOA4P06727 396 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 MYBL1P10243 752 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 KLC1Q07866 573 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 CSTF3Q12996 717 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms