RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 TDRD5Q8NAT2 981 aaKnown RBP19.44■□□□□ 0.7
COL9A1-210ENST00000493682 FEZF2Q8TBJ5 459 aa19.44■□□□□ 0.7
COL9A1-210ENST00000493682 URGCPQ8TCY9 931 aa19.44■□□□□ 0.7
COL9A1-210ENST00000493682 PSPC1Q8WXF1 523 aaKnown RBP19.44■□□□□ 0.7
COL9A1-210ENST00000493682 MINDY3Q9H8M7 445 aa19.44■□□□□ 0.7
COL9A1-210ENST00000493682 DBR1Q9UK59 544 aaKnown RBP19.44■□□□□ 0.7
COL9A1-210ENST00000493682 DDHD2O94830 711 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 ASGR2P07307 311 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 GCFC2P16383 781 aaKnown RBP19.43■□□□□ 0.7
COL9A1-210ENST00000493682 HOXA11P31270 313 aaPredicted RBP19.43■□□□□ 0.7
COL9A1-210ENST00000493682 RFC5P40937 340 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 LAMTOR4Q0VGL1 99 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 UBXN11Q5T124 520 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 TMC5Q6UXY8 1006 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 SRGAP1Q7Z6B7 1085 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 CABP7Q86V35 215 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 PPFIBP1Q86W92 1011 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 EXOC8Q8IYI6 725 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 HAS1Q92839 578 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 IRF2BPLQ9H1B7 796 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 RSAD1Q9HA92 442 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 PDRG1Q9NUG6 133 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 LIMD1Q9UGP4 676 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 USTQ9Y2C2 406 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 PPME1Q9Y570 386 aa19.43■□□□□ 0.7
COL9A1-210ENST00000493682 NUBP1P53384 320 aa19.42■□□□□ 0.7
COL9A1-210ENST00000493682 SCRN1Q12765 414 aa19.42■□□□□ 0.7
COL9A1-210ENST00000493682 C4orf19Q8IY42 314 aa19.42■□□□□ 0.7
COL9A1-210ENST00000493682 PLCD3Q8N3E9 789 aa19.42■□□□□ 0.7
COL9A1-210ENST00000493682 KLHL5Q96PQ7 755 aa19.42■□□□□ 0.7
COL9A1-210ENST00000493682 LXNQ9BS40 222 aa19.42■□□□□ 0.7
COL9A1-210ENST00000493682 EMILIN2Q9BXX0 1053 aa19.42■□□□□ 0.7
COL9A1-210ENST00000493682 BMP2KQ9NSY1 1161 aaPredicted RBP19.42■□□□□ 0.7
COL9A1-210ENST00000493682 GJB4Q9NTQ9 266 aa19.42■□□□□ 0.7
COL9A1-210ENST00000493682 STK39Q9UEW8 545 aa19.42■□□□□ 0.7
COL9A1-210ENST00000493682 CNTNAP2Q9UHC6 1331 aa19.42■□□□□ 0.7
COL9A1-210ENST00000493682 TBX3O15119 743 aa19.41■□□□□ 0.7
COL9A1-210ENST00000493682 CCNT1O60563 726 aaKnown RBP19.41■□□□□ 0.7
COL9A1-210ENST00000493682 CDKL5O76039 1030 aa19.41■□□□□ 0.7
COL9A1-210ENST00000493682 ALDH2P05091 517 aa19.41■□□□□ 0.7
COL9A1-210ENST00000493682 SSBP05455 408 aaKnown RBP eCLIP19.41■□□□□ 0.7
COL9A1-210ENST00000493682 YWHABP31946 246 aaKnown RBP19.41■□□□□ 0.7
COL9A1-210ENST00000493682 EPHA7Q15375 998 aa19.41■□□□□ 0.7
COL9A1-210ENST00000493682 PIK3AP1Q6ZUJ8 805 aa19.41■□□□□ 0.7
COL9A1-210ENST00000493682 OXER1Q8TDS5 423 aa19.41■□□□□ 0.7
COL9A1-210ENST00000493682 ATOH1Q92858 354 aaPredicted RBP19.41■□□□□ 0.7
COL9A1-210ENST00000493682 FAM193BQ96PV7 902 aaPredicted RBP19.41■□□□□ 0.7
COL9A1-210ENST00000493682 TMEM175Q9BSA9 504 aa19.41■□□□□ 0.7
COL9A1-210ENST00000493682 SFXN1Q9H9B4 322 aa19.41■□□□□ 0.7
COL9A1-210ENST00000493682 RGL1Q9NZL6 768 aa19.41■□□□□ 0.7
COL9A1-210ENST00000493682 KANSL3Q9P2N6 904 aa19.41■□□□□ 0.7
COL9A1-210ENST00000493682 FAN1Q9Y2M0 1017 aa19.41■□□□□ 0.7
COL9A1-210ENST00000493682 H0Y858 1186 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 GALR2O43603 387 aaPredicted RBP19.4■□□□□ 0.7
COL9A1-210ENST00000493682 GAS2O43903 313 aaKnown RBP19.4■□□□□ 0.7
COL9A1-210ENST00000493682 ST18O60284 1047 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 DTNBO60941 627 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 LILRB3O75022 631 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 POMCP01189 267 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 CNPP09543 421 aaKnown RBP19.4■□□□□ 0.7
COL9A1-210ENST00000493682 NCLP19338 710 aaKnown RBP19.4■□□□□ 0.7
COL9A1-210ENST00000493682 KLRC2P26717 231 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 CLCN4P51793 760 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 EMC2Q15006 297 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 NCAPH2Q6IBW4 605 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 OTUD6AQ7L8S5 288 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 GPR149Q86SP6 731 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 FERMT3Q86UX7 667 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 TMEM105Q8N8V8 129 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 RNF149Q8NC42 400 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 TCP11Q8WWU5 503 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 DYDC2Q96IM9 177 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 STK36Q9NRP7 1315 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 MYO10Q9HD67 2058 aa19.4■□□□□ 0.7
COL9A1-210ENST00000493682 USP34Q70CQ2 3546 aa19.39■□□□□ 0.69
COL9A1-210ENST00000493682 NRP1O14786 923 aa19.39■□□□□ 0.69
COL9A1-210ENST00000493682 ZBTB39O15060 712 aa19.39■□□□□ 0.69
COL9A1-210ENST00000493682 ASAP2O43150 1006 aa19.39■□□□□ 0.69
COL9A1-210ENST00000493682 MARCH6O60337 910 aa19.39■□□□□ 0.69
COL9A1-210ENST00000493682 GFRA3O60609 400 aa19.39■□□□□ 0.69
COL9A1-210ENST00000493682 XBP1P17861 261 aa19.39■□□□□ 0.69
COL9A1-210ENST00000493682 SPIRE1Q08AE8 756 aa19.39■□□□□ 0.69
COL9A1-210ENST00000493682 CTTNQ14247 550 aaKnown RBP19.39■□□□□ 0.69
COL9A1-210ENST00000493682 XKR9Q5GH70 373 aa19.39■□□□□ 0.69
COL9A1-210ENST00000493682 SMG8Q8ND04 991 aaKnown RBP19.39■□□□□ 0.69
COL9A1-210ENST00000493682 NAP1L4Q99733 375 aaKnown RBP19.39■□□□□ 0.69
COL9A1-210ENST00000493682 ZSWIM4Q9H7M6 989 aa19.39■□□□□ 0.69
COL9A1-210ENST00000493682 MRPL17Q9NRX2 175 aaKnown RBP19.39■□□□□ 0.69
COL9A1-210ENST00000493682 SPDYE4A6NLX3 237 aa19.38■□□□□ 0.69
COL9A1-210ENST00000493682 ABCB7O75027 752 aa19.38■□□□□ 0.69
COL9A1-210ENST00000493682 CYP4A11Q02928 519 aa19.38■□□□□ 0.69
COL9A1-210ENST00000493682 EARS2Q5JPH6 523 aaKnown RBP19.38■□□□□ 0.69
COL9A1-210ENST00000493682 CNNM3Q8NE01 707 aa19.38■□□□□ 0.69
COL9A1-210ENST00000493682 ACSF2Q96CM8 615 aaPredicted RBP19.38■□□□□ 0.69
COL9A1-210ENST00000493682 MTRQ99707 1265 aa19.38■□□□□ 0.69
COL9A1-210ENST00000493682 UBN1Q9NPG3 1134 aa19.38■□□□□ 0.69
COL9A1-210ENST00000493682 DENND4AQ7Z401 1863 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 FAM205CA6NFA0 338 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 C2CD2LO14523 706 aa19.37■□□□□ 0.69
COL9A1-210ENST00000493682 TSPAN1O60635 241 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms