RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 CDR1P51861 262 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 ZNF131P52739 623 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 ETF1P62495 437 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 TUBB4BP68371 445 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 LY6KQ17RY6 165 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 XKR3Q5GH77 459 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 SPATA1Q5VX52 437 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 IQSEC1Q6DN90 963 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 SLC30A9Q6PML9 568 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 MICALCLQ6ZW33 695 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 CCDC60Q8IWA6 550 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 TRMT44Q8IYL2 757 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 SNRNP27Q8WVK2 155 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 CCDC43Q96MW1 224 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 REEP2Q9BRK0 252 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 RUSC1Q9BVN2 902 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 PARD6BQ9BYG5 372 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 TSGA10Q9BZW7 698 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 OLFML3Q9NRN5 406 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 GJD2Q9UKL4 321 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 GDAQ9Y2T3 454 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 UBE4BO95155 1302 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 GOLGA6L10A6NI86 522 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 BACH1O14867 736 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 KIAA0754O94854 1291 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 MAPTP10636 758 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 CCNE1P24864 410 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 GBP2P32456 591 aaPredicted RBP7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 LACTBP83111 547 aaPredicted RBP7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 ROR2Q01974 943 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 PRKCEQ02156 737 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 ACVR2BQ13705 512 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 SLMAPQ14BN4 828 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 SWSAP1Q6NVH7 229 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 PADI6Q6TGC4 694 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 B4GALNT4Q76KP1 1039 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 EEPD1Q7L9B9 569 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 PLPPR4Q7Z2D5 763 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 KIAA0895Q8NCT3 520 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 SLC17A8Q8NDX2 589 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 NOC3LQ8WTT2 800 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 ZFAND2BQ8WV99 257 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 GOLGA1Q92805 767 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 ALS2CR12Q96Q35 445 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 GPR20Q99678 358 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 CARD6Q9BX69 1037 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 NIFKQ9BYG3 293 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 GBP3Q9H0R5 595 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 DDX20Q9UHI6 824 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 CTNND2Q9UQB3 1225 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 PCDHA2Q9Y5H9 948 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 NOP56O00567 594 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 LIN7AO14910 233 aaPredicted RBP7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 ZNF862O60290 1169 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 FAM13AO94988 1023 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 FERP16591 822 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 PEX19P40855 299 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 ARHGAP1Q07960 439 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 STK4Q13043 487 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 GRM1Q13255 1194 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 ALCAMQ13740 583 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 KIF22Q14807 665 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 SNCBQ16143 134 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 DUSP28Q4G0W2 176 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 CAPRIN2Q6IMN6 1127 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 STXBP4Q6ZWJ1 553 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 CCDC170Q8IYT3 715 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 NELFBQ8WX92 580 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 YIPF2Q9BWQ6 316 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 MMADHCQ9H3L0 296 aaPredicted RBP7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 BCAS3Q9H6U6 928 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 PARVGQ9HBI0 331 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 NRBP2Q9NSY0 501 aa7.86□□□□□ -1.15
SMARCE1-211ENST00000493660 NPHP3-ACAD11A0A0J9YXS1 232 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 EIF3DO15371 548 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 DGAT1O75907 488 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 HOXD8P13378 290 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 TCF7P36402 384 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 STAT5BP51692 787 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 RTP1P59025 263 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 LRRC63Q05C16 580 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 BMT2Q1RMZ1 405 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 LRRC23Q53EV4 343 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 XKR9Q5GH70 373 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 HERC4Q5GLZ8 1057 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 CENPPQ6IPU0 288 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 ZNF280DQ6N043 979 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 ANO5Q75V66 913 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 TAX1BP1Q86VP1 789 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 SMYD4Q8IYR2 804 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 MYOCDQ8IZQ8 938 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 CCDC150Q8NCX0 1101 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 MCPH1Q8NEM0 835 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 PPTC7Q8NI37 304 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 P2RX5Q93086 422 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 CCDC114Q96M63 670 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 SPATA33Q96N06 139 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 PCYT2Q99447 389 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 SMARCAD1Q9H4L7 1026 aa7.85□□□□□ -1.15
SMARCE1-211ENST00000493660 AZI2Q9H6S1 392 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms